Structure of CD84 provides insight into SLAM family function

Qingrong Yan1, Vladimir N Malashkevich, Alexander Fedorov

  • 1Department of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.

Insights

Signaling Lymphocyte Activation Molecule (SLAM) family receptors, like CD84, self-associate with varying affinities. Structural analysis reveals conserved dimerization, suggesting a role in immune cell interactions within the immunological synapse.

Area of Science:

  • Immunology
  • Structural Biology
  • Molecular Interactions

Background:

  • The Signaling Lymphocyte Activation Molecule (SLAM) family comprises receptors modulating adaptive and innate immunity.
  • SLAM receptors share a common ectodomain structure with variable domains responsible for ligand recognition.
  • CD84, a homophilic SLAM member, enhances IFN-gamma secretion in T cells.

Purpose of the Study:

  • To investigate the self-association properties and structural basis of CD84 homophilic interactions.
  • To compare CD84 dimerization with other SLAM family members.
  • To understand the implications of SLAM family receptor structure and affinity on immune cell function.

Main Methods:

  • Biochemical studies to determine CD84 self-association affinity (K(d)).
  • X-ray crystallography to determine the 2.0 Å crystal structure of the human CD84 immunoglobulin variable domain.
  • Comparative structural analysis with other SLAM family members, such as NTB-A.

Main Results:

  • CD84 exhibits strong self-association with a K(d) in the submicromolar range.
  • The crystal structure reveals an orthogonal homophilic dimer of CD84, similar to NTB-A.
  • Structural and chemical differences at homophilic interfaces prevent undesired heterodimer formation among SLAM family receptors.
  • All two-domain SLAM family homophilic dimers share a kinked organization, approximately 140 Å end-to-end.

Conclusions:

  • SLAM family homophilic affinities vary significantly, potentially influencing distinct signaling behaviors.
  • Conserved structural features of SLAM homophilic dimers facilitate colocalization within the immunological synapse.
  • This colocalization mechanism may enable bridging of T cells and antigen-presenting cells.

Related Concept Videos

T Cell Activation and Clonal Selection01:22

T Cell Activation and Clonal Selection

T cells are integral to our adaptive immune system, recognizing and effectively responding to foreign antigens. T cell activation and clonal selection are pivotal in orchestrating this immune response. This article elucidates these mechanisms, detailing the roles of cluster of differentiation (CD) markers, major histocompatibility complex (MHC) molecules, costimulatory signals, and the process of clonal selection.
Naive T cells that have not yet encountered an antigen express two primary CD...
Structure of Cadherins01:25

Structure of Cadherins

The cadherins were one of the first cell adhesion molecules discovered; the term “cadherins”   is based on their calcium-dependent adhering properties. The first cadherins discovered on the epithelial, neuronal, and placental cells were named E-cadherin, P-cadherin, and N-cadherin, respectively. These classical cadherins share sequence and structural similarities. Other cadherins, including those involved in cell signaling, are grouped into non-classical cadherins. This diversity of cadherins...
Immunoglobulin-like Cell Adhesion Molecules01:31

Immunoglobulin-like Cell Adhesion Molecules

Immunoglobulin-like cell adhesion molecules or Ig-CAMs are a versatile group of cell surface glycoproteins belonging to the immunoglobulin protein superfamily. Ig-CAMs possess the characteristic immunoglobulin protein domains and other domains such as the fibronectin type III domain. The Ig domains are glycosylated to varying degrees in different Ig-CAMs.
Ig-CAMs exhibit either homophilic binding (to other Ig-CAMs) or heterophilic binding (to other ligands such as integrins). While most Ig-CAMs...
Assembly of Signaling Complexes01:30

Assembly of Signaling Complexes

Multiprotein signaling complexes are formed in a dynamic process involving protein-protein interactions at the cytoplasmic domain of transmembrane receptors or enzymatic and non-enzymatic proteins associated with the receptor. These complexes ensure the activation and propagation of intracellular signals that regulate cell functions.
Interaction domains in cell signaling
Interaction domains recognize exposed features of their binding partners containing post-translationally modified sequences,...
Antibody Structure01:10

Antibody Structure

Overview
Antibodies, also known as immunoglobulins (Ig), are essential players of the adaptive immune system. These antigen-binding proteins are produced by B cells and make up 20 percent of the total blood plasma by weight. In mammals, antibodies fall into five different classes, which each elicits a different biological response upon antigen binding.
The Y-Shaped Structure of Antibodies Consists of Four Polypeptide Chains
Antibodies consist of four polypeptide chains: two identical heavy...
Cell Adhesion Molecules - Types and Functions01:20

Cell Adhesion Molecules - Types and Functions

Cell adhesion molecules (CAMs) are pivotal to multicellularity and the coordinated functioning of tissues and organ systems. They enable physical interactions between cells and provide mechanical strength to tissues. They also function as receptors for signal transmission across the plasma membrane. The CAMs are broadly classified into four families - integrins, cadherins, selectins, and immunoglobulin-like CAMs (IgCAMs).
CAM Families
The Integrin family of proteins is primarily  involved in a...