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Structure of CD84 provides insight into SLAM family function
Qingrong Yan1, Vladimir N Malashkevich, Alexander Fedorov
1Department of Cell Biology, Albert Einstein College of Medicine, Bronx, NY 10461, USA.
Insights
Signaling Lymphocyte Activation Molecule (SLAM) family receptors, like CD84, self-associate with varying affinities. Structural analysis reveals conserved dimerization, suggesting a role in immune cell interactions within the immunological synapse.
Area of Science:
- Immunology
- Structural Biology
- Molecular Interactions
Background:
- The Signaling Lymphocyte Activation Molecule (SLAM) family comprises receptors modulating adaptive and innate immunity.
- SLAM receptors share a common ectodomain structure with variable domains responsible for ligand recognition.
- CD84, a homophilic SLAM member, enhances IFN-gamma secretion in T cells.
Purpose of the Study:
- To investigate the self-association properties and structural basis of CD84 homophilic interactions.
- To compare CD84 dimerization with other SLAM family members.
- To understand the implications of SLAM family receptor structure and affinity on immune cell function.
Main Methods:
- Biochemical studies to determine CD84 self-association affinity (K(d)).
- X-ray crystallography to determine the 2.0 Å crystal structure of the human CD84 immunoglobulin variable domain.
- Comparative structural analysis with other SLAM family members, such as NTB-A.
Main Results:
- CD84 exhibits strong self-association with a K(d) in the submicromolar range.
- The crystal structure reveals an orthogonal homophilic dimer of CD84, similar to NTB-A.
- Structural and chemical differences at homophilic interfaces prevent undesired heterodimer formation among SLAM family receptors.
- All two-domain SLAM family homophilic dimers share a kinked organization, approximately 140 Å end-to-end.
Conclusions:
- SLAM family homophilic affinities vary significantly, potentially influencing distinct signaling behaviors.
- Conserved structural features of SLAM homophilic dimers facilitate colocalization within the immunological synapse.
- This colocalization mechanism may enable bridging of T cells and antigen-presenting cells.
Abstract:
The signaling lymphocyte activation molecule (SLAM) family includes homophilic and heterophilic receptors that modulate both adaptive and innate immune responses. These receptors share a common ectodomain organization: a membrane-proximal immunoglobulin constant domain and a membrane-distal immunoglobulin variable domain that is responsible for ligand recognition. CD84 is a homophilic family member that enhances IFN-gamma secretion in activated T cells. Our solution studies revealed that CD84 strongly self-associates with a K(d) in the submicromolar range. These data, in combination with previous reports, demonstrate that the SLAM family homophilic affinities span at least three orders of magnitude and suggest that differences in the affinities may contribute to the distinct signaling behavior exhibited by the individual family members. The 2.0 A crystal structure of the human CD84 immunoglobulin variable domain revealed an orthogonal homophilic dimer with high similarity to the recently reported homophilic dimer of the SLAM family member NTB-A. Structural and chemical differences in the homophilic interfaces provide a mechanism to prevent the formation of undesired heterodimers among the SLAM family homophilic receptors. These structural data also suggest that, like NTB-A, all SLAM family homophilic dimers adopt a highly kinked organization spanning an end-to-end distance of approximately 140 A. This common molecular dimension provides an opportunity for all two-domain SLAM family receptors to colocalize within the immunological synapse and bridge the T cell and antigen-presenting cell.
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