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Published on: September 28, 2020
The C-terminus of ICln is natively disordered but displays local structural preformation
Andreas Schedlbauer1, Rosaria Gandini, Georg Kontaxis
1Max F. Perutz Laboratories, University of Vienna, Vienna, Austria.
Insights
The C-terminus of ICln (Intracellular决赛) is intrinsically unstructured but shows preferences for alpha-helical and beta-strand formations. This finding provides insights into ICln protein structure and function.
Area of Science:
- Biochemistry
- Structural Biology
- Molecular Biology
Background:
- ICln (Intracellular决赛) is a crucial protein involved in diverse cellular processes including cell volume regulation, angiogenesis, and RNA processing.
- Previous studies elucidated the N-terminus structure, revealing a PH-like domain and an unstructured region with interaction sites.
Purpose of the Study:
- To determine the structural characteristics of the C-terminus of ICln (residues Q159-H235).
- To investigate the secondary structure preferences within the intrinsically unstructured C-terminal region.
Main Methods:
- Nuclear Magnetic Resonance (NMR) spectroscopy was employed for sequence-specific resonance assignments.
- (13)Cα-(13)Cβ secondary chemical shifts were analyzed to identify secondary structure propensities.
Main Results:
- The C-terminus of ICln (residues Q159-H235) was confirmed to be intrinsically unstructured.
- Specific regions within the C-terminus exhibit preferences for secondary structures: alpha-helical organization (E170-E187) and extended conformations/beta-strands (D161-Y168 and E217-T223).
Conclusions:
- The C-terminus of ICln, while largely unstructured, possesses localized secondary structure preferences.
- These findings contribute to a more comprehensive understanding of ICln's overall structure-function relationship.
Abstract:
ICln is a vital, ubiquitously expressed protein with roles in cell volume regulation, angiogenesis, cell morphology, activation of platelets and RNA processing. In previous work we have determined the 3D structure of the N-terminus of ICln (residues 1-159), which folds into a PH-like domain followed by an unstructured region (residues H134 - Q159) containing protein-protein interaction sites. Here we present sequence-specific resonance assignments of the C-terminus (residues Q159 - H235) of ICln by NMR, and show that this region of the protein is intrinsically unstructured. By applying (13)Cα- (13)Cβ secondary chemical shifts to detect possible preferences for secondary structure elements we show that the C-terminus of ICln adopts a preferred α-helical organization between residues E170 and E187, and exists preferentially in extended conformations (β-strands) between residues D161 to Y168 and E217 to T223.
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