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Updated: Apr 27, 2026

Visualization of DNA Repair Proteins Interaction by Immunofluorescence
Published on: June 26, 2020
Chromatin reader Brd4 functions in Ig class switching as a repair complex adaptor of nonhomologous end-joining
Andre Stanlie1, Ashraf S Yousif1, Hideo Akiyama2
1Department of Immunology and Genomic Medicine, Graduate School of Medicine, Kyoto University, Yoshida Sakyo-ku, Kyoto 606-8501, Japan.
Insights
The bromodomain protein Brd4 is essential for repairing DNA breaks during B cell class switch recombination (CSR). Brd4 acts as a chromatin platform, recruiting repair factors to ensure proper immunoglobulin gene alteration.
Area of Science:
- Immunology
- Molecular Biology
- Epigenetics
Background:
- Class switch recombination (CSR) is a critical B cell process involving DNA breaks and repair at the immunoglobulin heavy-chain locus.
- While factors promoting DNA break generation by activation-induced cytidine deaminase (AID) are known, the role of chromatin adaptors in DNA repair during CSR is unclear.
Purpose of the Study:
- To investigate the involvement of chromatin adaptors, specifically Brd4, in the DNA repair phase of class switch recombination.
- To elucidate the mechanism by which Brd4 influences nonhomologous end-joining (NHEJ) repair during CSR.
Main Methods:
- Depletion of Brd4 from chromatin in B cells.
- Analysis of DNA break generation and repair during CSR induced by AID and I-SceI.
- Assessment of repair factor recruitment (53BP1, uracil DNA glycosylase) to switch regions.
- Evaluation of switch junctional microhomology and Igh/c-myc translocation.
Main Results:
- Brd4 depletion impaired CSR without affecting DNA break formation.
- Brd4 was recruited to DNA break sites.
- Brd4 inhibition reduced the accumulation of 53BP1 and uracil DNA glycosylase at switch regions.
- Perturbation of switch junctional microhomology and reduced Igh/c-myc translocation were observed upon Brd4 inhibition.
Conclusions:
- Brd4 is a critical chromatin adaptor for the nonhomologous end-joining (NHEJ) repair pathway during class switch recombination.
- Brd4 functions as a chromatin platform, facilitating the recruitment of essential DNA repair components.
- These findings highlight Brd4's role in both CSR and general DNA damage repair mechanisms.
Abstract:
Class switch recombination (CSR) is a B cell-specific genomic alteration induced by activation-induced cytidine deaminase (AID)-dependent DNA break at the immunoglobulin heavy-chain locus, followed by repair. Although chromatin-associated factors in promoting AID-induced DNA break have been widely reported, the involvement of chromatin adaptors at the repair phase of CSR remains unknown. Here, we show that the acetylated histone reader Brd4 is critical for nonhomologous end-joining (NHEJ) repair of AID- and I-SceI-induced DNA breaks. Brd4 was recruited to the DNA break regions, and its depletion from the chromatin caused CSR impairment without affecting the DNA break generation. Inhibition of Brd4 suppressed the accumulation of 53BP1 and uracil DNA glycosylase at the switch regions, perturbed the switch junctional microhomology, and reduced Igh/c-myc translocation. We conclude that Brd4 serves as a chromatin platform required for the recruitment of repair components during CSR and general DNA damage.
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