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Updated: Apr 24, 2026

A Guide to Production, Crystallization, and Structure Determination of Human IKK1/α
Published on: November 2, 2018
IRAK4 dimerization and trans-autophosphorylation are induced by Myddosome assembly
Ryan Ferrao1, Hao Zhou2, Yibing Shan3
1Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, MA 02115, USA; Program in Cellular and Molecular Medicine, Boston Children's Hospital, Boston, MA 02115, USA; Weill Cornell Graduate School of Medical Sciences, New York, NY 10065, USA.
Insights
Interleukin-1 receptor-associated kinase 4 (IRAK4) is activated through dimerization, a process crucial for its autophosphorylation and downstream signaling in immune pathways. This study reveals how IRAK4 dimerization drives its autoactivation mechanism.
Area of Science:
- Biochemistry
- Molecular Biology
- Immunology
Background:
- Trans-autophosphorylation is a common protein kinase activation mechanism, but its details remain unclear.
- Interleukin-1 receptor-associated kinase 4 (IRAK4) is essential for Toll-like receptor and interleukin-1 receptor signaling, mediating NF-κB activation via the Myddosome complex.
Purpose of the Study:
- To elucidate the molecular basis of IRAK4 activation through trans-autophosphorylation.
- To investigate the role of dimerization in IRAK4 kinase activity and signaling.
Main Methods:
- Determined the dissociation constant (KD) for unphosphorylated IRAK4 dimerization.
- Obtained the crystal structure of the unphosphorylated IRAK4 dimer.
- Assessed IRAK4 autophosphorylation in vitro and ligand-dependent signaling in cellular models.
Main Results:
- Unphosphorylated IRAK4 dimerizes with a KD of 2.5 μM.
- Myddosome assembly significantly enhances IRAK4 autophosphorylation.
- Crystal structure reveals a conformation poised for trans-autophosphorylation.
- Dimerization is essential for both in vitro IRAK4 autophosphorylation and cellular signaling.
Conclusions:
- IRAK4 activation occurs via an oligomerization-driven allosteric mechanism.
- Dimerization facilitates trans-autophosphorylation by positioning the activation loop phosphosite.
- This mechanism of autoactivation may be applicable to other kinases activated by autophosphorylation.
Abstract:
Trans-autophosphorylation is among the most prevalent means of protein kinase activation, yet its molecular basis is poorly defined. In Toll-like receptor and interleukin-1 receptor signaling pathways, the kinase IRAK4 is recruited to the membrane-proximal adaptor MyD88 through death domain (DD) interactions, forming the oligomeric Myddosome and mediating NF-κB activation. Here we show that unphosphorylated IRAK4 dimerizes in solution with a KD of 2.5 μM and that Myddosome assembly greatly enhances IRAK4 kinase domain (KD) autophosphorylation at sub-KD concentrations. The crystal structure of the unphosphorylated IRAK4(KD) dimer captures a conformation that appears to represent the actual trans-autophosphorylation reaction, with the activation loop phosphosite of one IRAK4 monomer precisely positioned for phosphotransfer by its partner. We show that dimerization is crucial for IRAK4 autophosphorylation in vitro and ligand-dependent signaling in cells. These studies identify a mechanism for oligomerization-driven allosteric autoactivation of IRAK4 that may be general to other kinases activated by autophosphorylation.
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