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Updated: Feb 1, 2026

A DNA/Ki67-Based Flow Cytometry Assay for Cell Cycle Analysis of Antigen-Specific CD8 T Cells in Vaccinated Mice
Published on: January 5, 2021
Antigen-specific CD8 T cells in cell cycle circulate in the blood after vaccination
Sonia Simonetti1,2, Ambra Natalini1,2, Antonella Folgori3
1Institute of Molecular Biology and Pathology, National Research Council (CNR), Rome, Italy.
Insights
Researchers discovered that antigen-specific CD8 T cells, crucial for adaptive immunity, actively divide in the blood after vaccination. This finding challenges previous assumptions about immune cell cycling locations.
Area of Science:
- Immunology
- Cell Biology
- Vaccinology
Background:
- Clonal expansion of antigen-specific T cells is fundamental to adaptive immunity.
- The precise locations where T cells initiate and complete cell division remain largely unknown.
- Limited experimental methods have hindered the study of T cell cycle progression in vivo.
Purpose of the Study:
- To investigate the cell cycle status of antigen-specific CD8 T cells following vaccination.
- To identify the anatomical sites where T cell proliferation occurs after viral vector immunization.
- To develop and apply novel flow cytometry techniques for analyzing T cell cycle phases.
Main Methods:
- Utilized Ki67 and DNA staining in conjunction with a new flow cytometry analysis strategy.
- Administered intramuscular vaccination with antigen-expressing viral vectors to BALB/c mice.
- Quantified antigen-specific CD8 T cells in G0, G1, and S-G2/M phases of the cell cycle.
Main Results:
- Antigen-specific CD8 T cells in the S-G2/M proliferative phases were detected early post-vaccination.
- Proliferating cells were found in lymph nodes, spleen, and unexpectedly, in the peripheral blood.
- A significant population of proliferating cells exhibited high scatter, previously undetected, underestimating cell frequency by up to sixfold in lymph nodes.
Conclusions:
- The blood serves as a site for the proliferation of antigen-specific CD8 T cells following vaccination.
- Current analytical methods may significantly underestimate the frequency of antigen-specific T cells.
- The presence of cycling T cells in blood offers novel translational opportunities for immunotherapy and vaccine development.
Abstract:
Although clonal expansion is a hallmark of adaptive immunity, the location(s) where antigen-responding T cells enter cell cycle and complete it have been poorly explored. This lack of knowledge stems partially from the limited experimental approaches available. By using Ki67 plus DNA staining and a novel strategy for flow cytometry analysis, we distinguished antigen-specific CD8 T cells in G0 , in G1 and in S-G2 /M phases of cell cycle after intramuscular vaccination of BALB/c mice with antigen-expressing viral vectors. Antigen-specific cells in S-G2 /M were present at early times after vaccination in lymph nodes (LNs), spleen and, surprisingly, also in the blood, which is an unexpected site for cycling of normal non-leukaemic cells. Most proliferating cells had high scatter profile and were undetected by current criteria of analysis, which under-estimated up to 6 times antigen-specific cell frequency in LNs. Our discovery of cycling antigen-specific CD8 T cells in the blood opens promising translational perspectives.
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