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VDJ-Seq: Deep Sequencing Analysis of Rearranged Immunoglobulin Heavy Chain Gene to Reveal Clonal Evolution Patterns of B Cell Lymphoma
Published on: December 28, 2015
Revisiting lymphocyte clonality testing in feline B-cell lymphoma
Julie Welter1, Tereza Duckova1, Sandra Groiss1
1Institute of Immunology, Department of Pathobiology, University of Veterinary Medicine Vienna, Austria.
Insights
Distinguishing feline lymphoma from normal lymphocytes is difficult. A new multiplex PCR assay improves diagnostic accuracy for B-cell clonality, but combined primer sets are recommended for routine feline lymphoma diagnosis.
Area of Science:
- Veterinary Pathology
- Molecular Diagnostics
- Oncology
Background:
- Cytological and histopathological reviews alone are insufficient for differentiating feline small-cell lymphoma from mature lymphocyte populations.
- Polymerase chain reaction (PCR)-based immunoglobulin (IG) and T-cell receptor (TCR) clonality testing are crucial complementary tools for definitive diagnosis.
- Existing PCR assays for feline B-cell neoplasms face challenges with false negative and false positive results, impacting diagnostic reliability.
Purpose of the Study:
- To evaluate the diagnostic sensitivity and specificity of a newly developed multiplex PCR assay for routine feline B-cell clonality testing.
- To compare the performance of different primer sets within the multiplex assay for improved diagnostic accuracy.
Main Methods:
- A retrospective study involving 24 feline patients with suspected lymphoma.
- Comparative clonality testing using a novel multiplex PCR assay with various primer sets.
- Utilized feline lymphoma cell lines and confirmed patient material as positive controls.
Main Results:
- The novel multiplex PCR assay demonstrated enhanced diagnostic sensitivity, specificity, accuracy, and positive predictive value compared to previous methods.
- A slight decrease in negative predictive value was observed with the new assay.
- No single primer set outperformed others; combined application is suggested for optimal results.
Conclusions:
- The developed multiplex PCR assay offers improved diagnostic performance for feline B-cell clonality.
- Combined use of multiple primer sets within the assay is recommended for routine veterinary diagnostics.
- Further prospective studies on larger feline patient cohorts are needed to fully understand assay dynamics and optimize primer set selection.
Abstract:
Differentiation between resident mature lymphocyte populations and small-cell lymphoma cannot be made by cytological review alone and remains challenging in histopathological review. These cases warrant application of complementary tools like PCR-based immunoglobulin (IG) and T-cell receptor (TCR) clonality testing for confirmation. Although primer coverage of potential IG gene rearrangements in feline B-cell neoplasms constantly improves, the possibility of false negative and false positive test results still poses a problem. In this retrospective study, we assessed diagnostic sensitivity and specificity of a novel developed multiplex PCR assay for routine diagnosis of B-cell clonality. Therefore, 24 feline patients were subjected to comparative clonality testing by using different primer sets. Feline lymphoma cell lines and confirmed patient material served as positive control. Compared to previous studies, this novel developed multiplex PCR assay showed positive effects on diagnostic sensitivity, specificity, accuracy, and positive predictive value accompanied by a slight impairment of negative predictive value. Notably, none of the primer sets was superior; hence, we recommend the combined application of the herein tested primer sets in routine diagnostics. However, a more in-depth-evaluation of the dynamic of assay specific parameters in dependency on primer set usage requires prospective studies on larger cohorts of feline patients.
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