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Published on: June 22, 2016
CD8 T Cell Virus Inhibition Assay Protocol
Yinyan Xu1, Ann Marie Weideman2,3, Maria Abad-Fernandez1
1Department of Microbiology & Immunology, UNC Chapel Hill School of Medicine, Chapel Hill, North Carolina, USA.
Insights
The viral inhibition assay (VIA) was improved with independent replicate cultures for better reproducibility in measuring CD8+ T cell HIV control. This enhances clinical testing of HIV vaccines and therapies.
Area of Science:
- Immunology
- Virology
- Clinical Research
Background:
- The human immunodeficiency virus (HIV)-1 viral inhibition assay (VIA) assesses CD8+ T cell-mediated inhibition of HIV replication in CD4+ T cells.
- This assay is crucial for clinical testing of HIV vaccines and immunotherapies, but variations exist in protocols and readouts.
- Existing VIA protocols differ in culture duration, CD4+ T cell purity, HIV strains used, and methods for quantifying viral inhibition.
Purpose of the Study:
- To describe modifications to a 7-day VIA protocol to improve assay reproducibility.
- To introduce independent replicate cultures for HIV-infected CD4+ T cells (HIV-CD4) and HIV-CD4:CD8 T cell cultures.
- To identify methodological and analysis changes for enhanced assay performance.
Main Methods:
- Modified a 7-day VIA protocol, emphasizing independent replicate cultures for HIV-CD4 and HIV-CD4:CD8 T cell cultures.
- Quantified virus inhibition using a ratio of weighted averages of p24+ cells in replicate cultures.
- Calculated 95% confidence intervals for inhibition measurements.
Main Results:
- Introduction of independent replicate cultures significantly improved assay reproducibility.
- Virus inhibition by CD8 T cells in people living with HIV (PLWH) on antiretroviral therapy (ART) remained largely stable over time.
- Identified specific methodological and analysis changes applicable to other VIA protocols.
Conclusions:
- The modified VIA protocol enhances reproducibility for assessing CD8+ T cell-mediated HIV inhibition.
- The stability of CD8 T cell inhibition in PLWH on ART supports the assay's utility for evaluating therapeutic interventions.
- These improvements facilitate more reliable clinical testing of HIV vaccines and immunotherapies.
Abstract:
The human immunodeficiency virus (HIV)-1 viral inhibition assay (VIA) measures CD8+ T cell-mediated inhibition of HIV replication in CD4+ T cells and is increasingly used for clinical testing of HIV vaccines and immunotherapies. Different VIAs that differ in length of CD8:CD4 T cell culture periods (6-13 days), purity of CD4 cultures [isolated CD4+ T cells or CD8+ depleted peripheral blood mononuclear cells (PBMCs)], HIV strains (laboratory strains, isolates, reporter viruses) and read-outs of virus inhibition (p24 ELISA, intracellular measurement of p24, luciferase reporter expression, and viral gag RNA) have been reported. Here, we describe multiple modifications to a 7-day VIA protocol, the most impactful being the introduction of independent replicate cultures for both HIV infected-CD4 (HIV-CD4) and HIV-CD4:CD8 T cell cultures. Virus inhibition was quantified using a ratio of weighted averages of p24+ cells in replicate cultures and the corresponding 95% confidence intervals. We identify methodological and analysis changes that could be incorporated into other protocols to improve assay reproducibility. We found that in people living with HIV (PLWH) on antiretroviral therapy (ART), CD8 T cell virus inhibition was largely stable over time, supporting the use of this assay and/or analysis methods to examine therapeutic interventions. Graphic abstract.
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