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Single-cell Analysis of Immunophenotype and Cytokine Production in Peripheral Whole Blood via Mass Cytometry
Published on: June 26, 2018
OMIP-087: Thirty-two parameter mass cytometry panel to assess human CD4 and CD8 T cell activation, memory subsets,
Alexis Sponaugle1, Maria Abad-Fernandez2, Nilu Goonetilleke1,2
1Department of Microbiology and Immunology, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina, USA.
Insights
We created a reproducible 32-marker mass cytometry panel for detailed immune cell analysis. This tool aids in monitoring CD4 and CD8 T cells for various diseases using minimal patient samples.
Area of Science:
- Immunology
- Cell Biology
- Biotechnology
Background:
- Accurate characterization of immune cells, particularly T cells, is crucial for understanding and managing diseases like infections, cancer, and autoimmunity.
- Existing methods may require significant sample volumes or lack the multiplexing capability to comprehensively analyze diverse immune subsets.
- There is a need for standardized, high-resolution panels for immune cell profiling in peripheral blood mononuclear cells (PBMCs).
Purpose of the Study:
- To develop and validate a highly reproducible 32-marker mass cytometry panel for comprehensive immune cell analysis.
- To enable detailed characterization of CD4 and CD8 T cell subsets, including memory, activation, cell cycling, and survival markers.
- To facilitate the classification of major CD4 T helper subsets within human PBMCs.
Main Methods:
- Development of a 32-color mass cytometry panel optimized for human PBMCs.
- Standardization and optimization protocols for high-throughput, reproducible immune profiling.
- Identification and gating strategies for canonical immune lineages, CD4 T cell subsets, and CD8 T cell memory populations.
Main Results:
- A highly reproducible 32-marker mass cytometry panel was successfully established.
- The panel allows for the measurement of all canonical immune lineages.
- Six distinct T cell memory subsets, activation, cell cycling, and survival markers were identified, alongside major CD4 T helper subsets.
Conclusions:
- This mass cytometry panel provides a robust and reproducible method for detailed immune cell analysis, particularly for CD4 and CD8 T cells.
- The panel's ability to characterize multiple immune parameters with limited sample input is valuable for clinical research.
- It enables comprehensive monitoring of immune responses in infectious diseases, cancer, and autoimmune conditions.
Abstract:
We developed a highly reproducible 32-marker mass cytometry panel able to measure all canonical immune lineages and perform detailed characterization of both CD4 and CD8 T cells in human peripheral blood mononuclear cells. In this panel, we identify six different T cell memory subsets, as well as markers of activation, cell cycling, and survival. In addition, this panel classifies all major CD4 T cell helper subsets. This panel enables detailed monitoring of CD4 and CD8 T cells in the context of infectious disease, cancer or autoimmunity with limited patient sample use. Detailed methods for standardization and optimization of the panel can be found in Supporting Information.

