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Updated: Aug 10, 2025

Application of High-speed Super-resolution SPEED Microscopy in Live Primary Cilium
Published on: January 16, 2018
Human IFT-A complex structures provide molecular insights into ciliary transport
Meiqin Jiang1, Vivek Reddy Palicharla2, Darcie Miller1
1Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN, USA.
Insights
Structural insights into Intraflagellar Transport (IFT)-A complex assembly and TULP3 interaction reveal mechanisms underlying ciliopathies. This study clarifies IFT-A architecture and its role in ciliary transport.
Area of Science:
- Structural Biology
- Cell Biology
- Molecular Medicine
Background:
- Intraflagellar transport (IFT) complexes (IFT-A and IFT-B) are crucial for cilia assembly and maintenance, moving along axonemal microtubules.
- Dysfunctional IFT subunits cause ciliopathies, but the precise mechanisms of IFT complex assembly and cargo transport remain unclear due to limited high-resolution structural data.
Purpose of the Study:
- To elucidate the high-resolution structure of the human IFT-A complex.
- To investigate the interaction between IFT-A and its cargo adapter TULP3.
- To understand the molecular basis of disease-causing mutations in ciliopathies.
Main Methods:
- Cryo-electron microscopy (cryo-EM) was employed to determine the structures of human IFT-A complexes.
- Structures were resolved at resolutions ranging from 3.0 to 3.9 Å.
- Analysis included examining IFT-A in the presence and absence of TULP3, and assessing the impact of disease mutations.
Main Results:
- The cryo-EM structures reveal the 'lariat' architecture of the IFT-A complex, highlighting interconnected core and peripheral subunits stabilized by zinc-binding domains.
- TULP3 binds to IFT-A via its N-terminal region, with interface mutations shown to impair cargo transport.
- The study details the molecular effects of disease-associated mutations on IFT-A complex formation and ciliary transport dynamics.
Conclusions:
- The determined IFT-A architecture provides fundamental insights into complex assembly and ciliary transport mechanisms.
- The findings clarify the role of TULP3 as a cargo adapter and its interaction interface with IFT-A.
- This structural and mechanistic understanding enables the rationalization of various ciliopathies linked to IFT subunit mutations.
Abstract:
Intraflagellar transport (IFT) complexes, IFT-A and IFT-B, form bidirectional trains that move along the axonemal microtubules and are essential for assembling and maintaining cilia. Mutations in IFT subunits lead to numerous ciliopathies involving multiple tissues. However, how IFT complexes assemble and mediate cargo transport lacks mechanistic understanding due to missing high-resolution structural information of the holo-complexes. Here we report cryo-EM structures of human IFT-A complexes in the presence and absence of TULP3 at overall resolutions of 3.0-3.9 Å. IFT-A adopts a "lariat" shape with interconnected core and peripheral subunits linked by structurally vital zinc-binding domains. TULP3, the cargo adapter, interacts with IFT-A through its N-terminal region, and interface mutations disrupt cargo transport. We also determine the molecular impacts of disease mutations on complex formation and ciliary transport. Our work reveals IFT-A architecture, sheds light on ciliary transport and IFT train formation, and enables the rationalization of disease mutations in ciliopathies.
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