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Updated: Jan 14, 2026

Bio-layer Interferometry for Measuring Kinetics of Protein-protein Interactions and Allosteric Ligand Effects
Published on: February 18, 2014
Protocol to measure the kinetics of MHC class II-influenza A binding using biolayer interferometry
Matias Cardenas1, Sasha Compton1, Ashkon Hunt1
1Department of Population Health, College of Veterinary Medicine, University of Georgia, Athens, GA 30602, USA.
Insights
Major histocompatibility complex (MHC) class II binds influenza A viruses. This study details a method using biolayer interferometry to measure these binding kinetics for various influenza A virus subtypes.
Area of Science:
- Immunology
- Virology
- Biochemistry
Background:
- Major histocompatibility complex (MHC) class II acts as a functional receptor for certain influenza A virus (FLUAV) subtypes.
- Understanding the binding kinetics between MHC class II and FLUAV is crucial for virological research.
Purpose of the Study:
- To present a novel protocol for quantifying the binding kinetics of MHC class II and influenza A virus interactions.
- To enable the screening of diverse FLUAV subtypes for their binding affinity to MHC class II.
Main Methods:
- Production of recombinant human leukocyte antigen DR isotype (HLA-DR) MHC class II utilizing a baculovirus expression system.
- Modification of HLA-DR for use as a biolayer interferometry (BLI) probe.
- Kinetic analysis of whole FLUAV viruses binding to the prepared BLI probe.
Main Results:
- A detailed protocol for measuring MHC class II-influenza A binding kinetics was successfully established.
- The method allows for the characterization of binding affinities between different FLUAV subtypes and MHC class II.
Conclusions:
- The developed biolayer interferometry protocol provides a robust method for studying MHC class II-influenza A virus interactions.
- This technique facilitates the screening and characterization of various influenza A virus subtypes' affinity for MHC class II, advancing our understanding of host-pathogen interactions.
Abstract:
Recent work has shown that major histocompatibility complex (MHC) class II is a functional receptor for some influenza A virus (FLUAV) subtypes. Here, we present a protocol to measure the kinetics of MHC class II-influenza A binding using biolayer interferometry. We describe steps for producing recombinant human leukocyte antigen DR isotype (HLA-DR) MHC class II using a baculovirus expression system. The HLA-DR antigen is then modified for its utilization as a biolayer interferometry (BLI) probe for kinetic experiments using whole FLUAV viruses. This protocol allows for the screening of different FLUAV subtypes and their affinity for MHC class II.

