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Updated: Jul 31, 2026

A Guide to Production, Crystallization, and Structure Determination of Human IKK1/α
Published on: November 2, 2018
Constitutive phosphorylation of I kappa B alpha by casein kinase II
C F Barroga1, J K Stevenson, E M Schwarz
1Molecular Biology and Virology Laboratory, Salk Institute, San Diego, CA 92186-5800, USA.
Insights
This study identifies a cellular kinase that phosphorylates I kappa B alpha, a protein regulating NF-kappa B/Rel. This phosphorylation is crucial for controlling NF-kappa B/Rel protein activity.
Area of Science:
- Molecular Biology
- Cell Signaling
- Protein Kinases
Background:
- NF-kappa B/Rel proteins are key regulators of immune and inflammatory responses.
- I kappa B alpha sequesters NF-kappa B/Rel in the cytoplasm, and its degradation precedes NF-kappa B activation.
- Understanding the regulation of I kappa B alpha phosphorylation is critical for controlling NF-kappa B signaling.
Purpose of the Study:
- To identify and characterize the cellular kinase responsible for phosphorylating I kappa B alpha.
- To elucidate the role of this kinase in the regulation of NF-kappa B/Rel protein activity.
Main Methods:
- Partial purification of a cellular kinase from murine cells.
- In vitro kinase assays using I kappa B alpha as a substrate.
- Site-directed mutagenesis of potential phosphorylation sites on I kappa B alpha.
- Antibody inhibition assays using antibodies against casein kinase II (CKII).
- Two-dimensional phosphopeptide mapping.
Main Results:
- A cellular kinase specifically phosphorylates the C-terminus of I kappa B alpha.
- The kinase activity is inhibited by antibodies against CKII alpha subunit.
- Mutation of CKII consensus sites on I kappa B alpha abolished phosphorylation.
- In vitro and in vivo phosphorylation patterns of I kappa B alpha were identical.
Conclusions:
- Casein kinase II (CKII) is responsible for the constitutive phosphorylation of I kappa B alpha.
- CKII-mediated phosphorylation of I kappa B alpha plays a role in regulating NF-kappa B/Rel protein activity.
Abstract:
The NF-kappa B/Rel proteins are sequestered in the cytoplasm in association with the phosphorylated form of I kappa B alpha. Upon induction with a wide variety of agents, the activity of NF-kappa B/Rel proteins is preceded by the rapid degradation of I kappa B alpha protein. We report the identification and partial purification of a cellular kinase from unstimulated or stimulated murine cells, which specifically phosphorylates the C terminus of I kappa B alpha. There are several consensus sites for casein kinase II (CKII) in the C-terminal region of I kappa B alpha. Additionally, the activity of the cellular kinase is blocked by antibodies against the alpha subunit of CKII. No phosphorylation of the C-terminal region of I kappa B alpha can be detected if the five possible serine and threonine residues that can be phosphorylated by CKII are mutated to alanine. A two-dimensional tryptic phosphopeptide map of I kappa B alpha from unstimulated cells was identical to that obtained by in vitro phosphorylation of I kappa B alpha with the partially purified cellular kinase. We propose that constitutive phosphorylation of I kappa B alpha is carried out by CKII.
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