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Updated: Sep 26, 2026

Visualization of Protein-protein Interaction in Nuclear and Cytoplasmic Fractions by Co-immunoprecipitation and In Situ Proximity Ligation Assay
Published on: January 16, 2017
NF-kappa B/Rel family members are physically associated phosphoproteins
1Biological Carcinogenesis and Development Program, Program Resources, Inc./DynCorp., NCI-Frederick Cancer Research and Development Center 21702-1201.
Insights
NF-kappa B/Rel proteins form complexes with inhibitors like I kappa B alpha in Jurkat T cells. These proteins are phosphoproteins, and their phosphorylation patterns change upon stimulation.
Area of Science:
- Immunology
- Molecular Biology
- Cell Signaling
Background:
- The NF-kappa B/Rel family plays a crucial role in immune responses and cellular signaling.
- Inhibitors such as I kappa B alpha regulate NF-kappa B activity.
- Understanding the post-translational modifications and interactions of these proteins is key to deciphering their function.
Purpose of the Study:
- To investigate the complex formation and phosphorylation status of NF-kappa B/Rel family proteins and their inhibitors in Jurkat T cells.
- To characterize the changes in phosphorylation upon stimulation with phorbol 12-myristate 13-acetate and phytohaemagglutinin.
Main Methods:
- Radioimmunoprecipitation followed by serial immunoblots.
- In vivo and in vitro phosphorylation experiments.
- Phosphopeptide mapping.
Main Results:
- NF-kappa B/Rel proteins (p80-c-Rel, p105-NF-kappa B, p65-NF-kappa B, p50-NF-kappa B) and the inhibitor p36-I kappa B alpha were detected in complexes in unstimulated Jurkat cells.
- p36-I kappa B alpha and p105 associate with NF-kappa B/Rel members but not each other.
- NF-kappa B/Rel family members and p36-I kappa B alpha are phosphoproteins, with both unphosphorylated and hyperphosphorylated forms of p36-I kappa B alpha found in complexes.
- Stimulation led to increased phosphorylation of p105-NF-kappa B and p50-NF-kappa B, with qualitative changes in p105 phosphorylation.
Conclusions:
- NF-kappa B/Rel proteins and their inhibitors exist in complexes and are subject to phosphorylation.
- Hyperphosphorylated I kappa B alpha remains capable of complex formation.
- Stimulation alters the phosphorylation state of key NF-kappa B pathway components, suggesting dynamic regulation.
Abstract:
We performed radioimmunoprecipitation followed by serial immunoblots to show that, in the unstimulated Jurkat T cell line, the NF-kappa B/Rel family proteins, p80-c-Rel, p105-NF-kappa B, p65-NF-kappa B, p50-NF-kappa B and p36-I kappa B alpha, can be detected as complexes using antisera against c-Rel, p105-NF-kappa B or p65-NF-kappa B. p36-I kappa B alpha and p105, both known inhibitors of NF-kappa B function, can physically associate with NF-kappa B/Rel family members, but not with each other. In vivo and in vitro phosphorylation experiments demonstrated that NF-kappa B/Rel family members, including p105, c-Rel, p50, p65 (for the first time for p50 and p65) and p36-I kappa B alpha are also phosphoproteins. Phosphoserine and phosphothreonine residues were identified in these proteins isolated from unstimulated Jurkat cells. Both unphosphorylated and hyperphosphorylated forms of p36-I kappa B alpha were found in the complexes, suggesting that hyperphosphorylated I kappa B alpha is still capable of associating with the NF-kappa B/Rel family members. After stimulation with phorbol 12-myristate 13-acetate and phytohaemagglutinin for 10 min, p105-NF-kappa B and p50-NF-kappa B, but not p36-I kappa B, were highly phosphorylated. Phosphopeptide mapping of p105 showed that phorbol ester/phytohaemagglutinin stimulation may change p105 phosphorylation qualitatively.
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