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Published on: January 30, 2016
Cloning of a cDNA encoding a human protein which binds a sequence in the c-myc gene similar to the
Y Z Stasiv1, T D Mashkova, B K Chernov
1Engelhardt Institute of Molecular Biology, Russian Academy of Sciences, Moscow.
Insights
Researchers identified a novel human protein that binds to the c-myc promoter. This protein, named IRLB (interferon-response-like binding), specifically recognizes an element crucial for c-myc gene regulation.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- The human c-myc gene is a critical proto-oncogene involved in cell growth and proliferation.
- Understanding the regulation of c-myc expression is essential for comprehending cancer development.
- Specific DNA-binding proteins play a key role in controlling gene transcription.
Purpose of the Study:
- To isolate and characterize a protein that binds to a specific element in the human c-myc promoter.
- To identify the DNA-binding domain and specificity of the isolated protein.
- To elucidate the role of this protein in c-myc gene regulation.
Main Methods:
- Screening of a human fibroblast lambda gt11 phage library using a specific oligonucleotide probe.
- Construction of an Escherichia coli strain expressing the cloned fusion protein.
- Analysis of protein-DNA interactions using DNase footprinting and oligonucleotide-binding specificity assays.
Main Results:
- A human cDNA clone encoding a c-myc promoter-binding protein (IRLB) was successfully isolated.
- The deduced amino acid sequence revealed a putative DNA-binding domain.
- DNase footprinting and binding assays confirmed that IRLB specifically recognizes the ISRE-like element in the c-myc P2 promoter region.
Conclusions:
- A novel human protein, IRLB, that binds to the c-myc promoter has been identified.
- IRLB specifically recognizes an interferon-stimulated response element (ISRE)-like sequence within the c-myc P2 promoter.
- This finding contributes to understanding the molecular mechanisms regulating human c-myc gene expression.
Abstract:
A human cDNA clone encoding a c-myc promoter-binding protein (IRLB) was selected by screening a human fibroblast lambda gt11 phage library with the hexamer oligodeoxyribonucleotide (oligo) 5'-GGCGGGAAAAAGAACGGA, corresponding to the protein-binding element of human c-myc similar to the interferon-stimulated response element (ISRE). The lambda gt11 phage clone, encoding a fusion protein which bound the probe oligo, was used to create an strain of Escherichia coli. The deduced amino-acid sequence of the cloned protein contains a putative alpha-helix which is expected to act as the DNA-binding domain. DNase footprinting analysis and oligo-binding specificity assays showed that the cloned factor recognizes the ISRE-like element of the P2 promoter region of human c-myc.
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