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Published on: October 8, 2009
Purification and properties of LR1, an inducible DNA binding protein from mammalian B lymphocytes
M Williams1, L A Hanakahi, N Maizels
1Department of Molecular Biophysics and Biochemistry, Yale University School of Medicine, New Haven, Connecticut 06510.
Insights
Researchers purified LR1, a lipopolysaccharide-inducible B cell DNA binding protein. Its activity depends on N-acetylglucosamine modification, crucial for binding immunoglobulin gene regions.
Area of Science:
- Immunology
- Molecular Biology
- Biochemistry
Background:
- LR1 is a B cell-specific DNA binding activity.
- It binds to sites within the immunoglobulin heavy chain enhancer and switch regions.
- LR1 is inducible by lipopolysaccharide.
Purpose of the Study:
- To purify the LR1 protein.
- To investigate the post-translational modifications of LR1.
- To understand the regulatory mechanisms of LR1 DNA binding activity.
Main Methods:
- Purification of LR1 from nuclear extracts of PD31 murine pre-B cells using three chromatographic steps.
- Analysis of LR1 DNA binding activity.
- Investigation of post-translational modifications, specifically N-acetylglucosamine addition.
- Anion exchange chromatography using Mono Q resin.
Main Results:
- Successfully purified the 106-kDa LR1 protein.
- Demonstrated that LR1 DNA binding activity is dependent on phosphorylation.
- Showed that LR1 undergoes post-translational modification by N-acetylglucosamine addition.
- Observed that DNA binding activity is restricted to a narrow peak at high salt concentrations during anion exchange chromatography, indicating the importance of modification.
Conclusions:
- LR1 is a lipopolysaccharide-inducible, B cell-specific DNA binding protein purified from murine pre-B cells.
- Post-translational modification, specifically N-acetylglucosamine addition, is critical for LR1's DNA binding activity.
- These modifications regulate LR1's function in immunoglobulin gene regulation.
Abstract:
LR1 is a lipopolysaccharide-inducible B cell-specific DNA binding activity, with sites in the immunoglobulin heavy chain enhancer and switch regions. We describe the purification of this 106-kDa protein from nuclear extracts of PD31 murine pre-B cells, using three chromatographic steps. The DNA binding activity of LR1 is dependent upon phosphorylation, and we show that LR1 is post-translationally modified by N-acetylglucosamine addition. The importance of regulatory modification to LR1 DNA binding activity is apparent from the chromatographic pattern on the anion exchange resin Mono Q: while the LR1 polypeptide elutes over a broad salt range from the column, DNA binding activity is confined to a narrow peak eluting at the highest salt.
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