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Characterization of Glycoproteins with the Immunoglobulin Fold by X-Ray Crystallography and Biophysical Techniques
Published on: July 5, 2018
Crystal structure of a cytokine-binding region of gp130
J Bravo1, D Staunton, J K Heath
1Laboratory of Molecular Biophysics, The Rex Richards Building, South Parks Road, Oxford OX1 3QU.
Insights
The structure of the glycoprotein 130 (gp130) receptor
Area of Science:
- Structural biology
- Biochemistry
- Molecular modeling
Background:
- The glycoprotein 130 (gp130) is a crucial cell surface receptor involved in cytokine signaling.
- Understanding the structural basis of gp130's interaction with cytokines is essential for deciphering its biological functions.
- Previous studies have characterized various cytokine receptors, but the uncomplexed structure of gp130 remained elusive.
Purpose of the Study:
- To determine the high-resolution three-dimensional structure of the cytokine-binding homology region of gp130.
- To elucidate the structural features of the uncomplexed gp130 receptor and compare it with ligand-bound family members.
- To investigate the implications of gp130's N-terminal structure for cytokine receptor function.
Main Methods:
- X-ray crystallography at 2.0 Å resolution.
- Analysis of protein structure and quaternary arrangement.
- Comparison with existing structural data of related cytokine receptors.
Main Results:
- The structure revealed a beta sandwich fold across the two domains, consistent with the cytokine receptor superfamily topology.
- The uncomplexed gp130 exhibited an L-shaped quaternary structure, similar to ligand-bound forms, with limited domain flexibility (approx. 3 degrees).
- Putative ligand-binding loops were found to be rigid, with a conserved phenylalanine residue positioned similarly to those in other receptors involved in ligand binding.
Conclusions:
- The determined structure provides critical insights into the unliganded state of gp130.
- The observed structural similarity and limited flexibility suggest a pre-organized binding site for cytokines.
- The N-terminal region's structure has significant implications for understanding the broader class of cytokine receptors, including those with additional immunoglobulin-like domains.
Abstract:
The structure of the cytokine-binding homology region of the cell surface receptor gp130 has been determined by X-ray crystallography at 2.0 A resolution. The beta sandwich structure of the two domains conforms to the topology of the cytokine receptor superfamily. This first structure of an uncomplexed receptor exhibits a similar L-shaped quaternary structure to that of ligand-bound family members and suggests a limited flexibility in relative domain orientation of some 3 degrees. The putative ligand-binding loops are relatively rigid, with a phenylalanine side chain similarly positioned to exposed aromatic residues implicated in ligand binding for other such receptors. The positioning and structure of the N-terminal portion of the polypeptide chain have implications for the structure and function of cytokine receptors, such as gp130, which contain an additional N-terminal immunoglobulin-like domain.
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