Related Experiment Video
Updated: Aug 9, 2026

Examination of Thymic Positive and Negative Selection by Flow Cytometry
Published on: October 8, 2012
Cathepsin L: critical role in Ii degradation and CD4 T cell selection in the thymus
1Howard Hughes Medical Institute and Department of Immunology, University of Washington School of Medicine, Seattle, WA 98195, USA.
Insights
Cathepsin L is essential for invariant chain degradation in thymic epithelial cells, impacting CD4+ T cell selection. This protease
Area of Science:
- Immunology
- Molecular Biology
- Cell Biology
Background:
- Invariant chain (Ii) degradation is crucial for MHC class II antigen presentation.
- Specific proteases mediate Ii degradation differently in various antigen-presenting cells.
- The cellular environment influences T cell selection processes.
Purpose of the Study:
- To investigate the role of Cathepsin L in invariant chain degradation.
- To compare Ii degradation in thymic epithelial cells versus bone marrow-derived antigen-presenting cells.
- To understand the implications for CD4+ T cell positive selection.
Main Methods:
- Utilized techniques to study invariant chain degradation in specific cell types.
- Assessed the necessity of Cathepsin L for Ii degradation in cortical thymic epithelial cells (cTECs) and bone marrow (BM)-derived antigen-presenting cells (APCs).
- Evaluated the impact on CD4+ T cell positive selection.
Main Results:
- Cathepsin L is required for invariant chain degradation in cTECs, but not in BM-derived APCs.
- This tissue-specific difference in Ii degradation affects the positive selection of CD4+ T cells.
- Distinct proteolytic environments exist in cells involved in T cell selection.
Conclusions:
- Protease activity, specifically Cathepsin L, plays a tissue-specific role in invariant chain degradation.
- The findings highlight differences in antigen processing pathways between cTECs and BM-derived APCs.
- Targeting tissue-specific proteases could offer a way to modulate CD4+ T cell responses in vivo.
Abstract:
Degradation of invariant chain (Ii) is a critical step in major histocompatibility complex class II-restricted antigen presentation. Cathepsin L was found to be necessary for Ii degradation in cortical thymic epithelial cells (cTECs), but not in bone marrow (BM)-derived antigen-presenting cells (APCs). Consequently, positive selection of CD4+ T cells was reduced. Because different cysteine proteinases are responsible for specific Ii degradation steps in cTECs and BM-derived APCs, the proteolytic environment in cells mediating positive and negative selection may be distinct. The identification of a protease involved in class II presentation in a tissue-specific manner suggests a potential means of manipulating CD4+ T cell responsiveness in vivo.
Related Concept Videos
Cell-mediated Immune Responses
Regulated Protein Degradation
Protein degradation plays two important roles in the cells. It helps to protect cells from misfolded or damaged proteins before they lead to a...
Caspases
T Cell Activation and Clonal Selection
Naive T cells that have not yet encountered an antigen express two primary CD...
T Cell Types and Functions
Th1 cells stimulate dendritic cells to express necessary co-stimulatory molecules on their surfaces for...
Cytotoxic T Cells-mediated Immune Response
Immunological surveillance is the ability of immune cells to monitor and eliminate infected cells with intracellular pathogens, neoplastically transformed cells, and cells with non-self antigens. Cytotoxic T cells and NK...

