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ABC Transporters: Exporter01:31

ABC Transporters: Exporter

6.1K
ATP-binding cassette or ABC transporter is the largest superfamily of integral membrane proteins. The transporters have transmembrane-binding domains (TMDs) and nucleotide-binding domains (NBDs). The TMDs are specific to their substrates, whereas the NBDs are similar to engines that complete ATP hydrolysis to complete the substrate transport. They can be full transporters consisting of two TMDs and NBDs, half transporters with one TMD and NBD, while some encoded with a single TMD or NBD are...
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ABC Transporters: Importer01:27

ABC Transporters: Importer

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ATP-binding cassette or ABC transporters are a class of ATP-driven pumps that hydrolyze ATP to move solutes across the membrane. They can be grouped into importers and exporters. While exporters are present in all domains of life, importers exist only in bacteria and some plants.
In bacteria, based on the number of transmembrane helices and the chemical nature of their substrates, the ABC importers can be divided into three types:
3.3K
Cotranslational Protein Translocation01:20

Cotranslational Protein Translocation

9.2K
Translocation of proteins across membranes is an ancient process that occurs even in bacteria and archaebacteria. In fact, the components of the translocation machinery are still conserved between prokaryotes and eukaryotes.
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...
9.2K
Nuclear Export01:42

Nuclear Export

4.7K
The nucleus restricts several proteins within and allows others to pass. The restricted proteins possess a nuclear retention sequence or NRS, anchoring them to the nuclear lamins and preventing their transport to the cytosol. The non-restricted proteins, after their synthesis, are transported to their site of action, such as the cytosol or other organelles, with the help of nuclear export signals or NES.
NES are of three types- the canonical 10-residue long leucine-rich signal and other...
4.7K
Bacterial Translocation and Protein Secretion01:26

Bacterial Translocation and Protein Secretion

349
Bacterial protein secretion involves translocation systems to ensure proteins reach their designated locations, including the plasma membrane, periplasm, outer membrane, or the external environment. These translocation systems are vital for bacterial physiology, supporting processes like membrane assembly, enzymatic activity in the periplasm, and interactions with the external environment. The division of labor between Sec and Tat pathways ensures efficiency in handling proteins with diverse...
349
Drug Absorption Mechanism: Carrier-Mediated Membrane Transport01:19

Drug Absorption Mechanism: Carrier-Mediated Membrane Transport

5.5K
Certain large, lipid-insoluble drug molecules that resemble amino acids, peptides, or glucose, require specialized carrier proteins to facilitate their diffusion across cell membranes. This transport can occur through either facilitated diffusion, which does not require energy input, or active transport, which does require energy input.
Facilitated diffusion is a passive process that utilizes human Solute Carrier (SLC) transporters. These transporters bind to the drug, undergo structural...
5.5K

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Video Experimental Relacionado

Updated: Dec 17, 2025

Author Spotlight: A Bicelle Crystallization Setup for ABC Transporter Membrane Proteins to Advance Drug Development
06:47

Author Spotlight: A Bicelle Crystallization Setup for ABC Transporter Membrane Proteins to Advance Drug Development

Published on: August 25, 2023

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Captura de la translocación del sustrato en un exportador ABC a nivel atómico

Hendrik Göddeke1, Lars V Schäfer1

  • 1Theoretical Chemistry, Faculty of Chemistry and Biochemistry, Ruhr University Bochum, 44780 Bochum, Germany.

Journal of the American Chemical Society
|June 25, 2020
PubMed
Resumen

Este estudio utilizó simulaciones de dinámica molecular para visualizar cómo los transportadores de casete de unión de ATP (ABC) mueven los fármacos a través de las membranas. Revela los mecanismos de translocación de fármacos y las interacciones del sustrato con el transportador y la bicapa lipídica.

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Área de la Ciencia:

  • La bioquímica
  • Biología estructural
  • Biología computacional

Sus antecedentes:

  • Los transportadores de casete de unión de ATP (ABC) son proteínas de membrana cruciales que utilizan la hidrólisis de ATP para mover sustratos a través de las membranas celulares.
  • Comprender la dinámica a nivel atómico de la translocación del sustrato es esencial para descifrar los mecanismos del transportador ABC.

Objetivo del estudio:

  • Elucidar el mecanismo dinámico de la translocación de sustratos por transportadores ABC a nivel atómico.
  • Investigar el transporte de daunorubicina y verapamil por el exportador heterodimérico ABC TM287/288.

Principales métodos:

  • Se emplearon simulaciones de dinámica molecular de todos los átomos para estudiar el transportador TM287/288 de *Thermotoga maritima*.
  • Las simulaciones se llevaron a cabo a una temperatura alta (375 K) durante múltiples microsegundos para capturar eventos dinámicos.

Principales resultados:

  • La translocación del sustrato se observó después de los cambios de conformación de acceso alternados (hacia adentro hacia afuera) del transportador ABC.
  • Los substratos daunorubicina y verapamil se liberaron del transportador orientado hacia el exterior hacia la bicapa lipídica debido a los efectos de solvación diferencial.
  • La daunorubicina se insertó de manera estable en el prospecto externo, mientras que el verapamilo exhibió un flip-flop dinámico entre los prospectos de dos capas.

Conclusiones:

  • El estudio proporciona información a nivel atómico sobre el acoplamiento quimiomecánico y el proceso de translocación del sustrato de los transportadores ABC.
  • La interacción diferencial del sustrato con la bicapa lipídica influye en la eficiencia de transporte neto, lo que potencialmente explica los ciclos de transporte inútiles.