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Five-Membered Heterocyclic Aromatic Compounds: Overview01:13

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Heterocyclic aromatic compounds are cyclic compounds that are aromatic and have one or more heteroatoms—atoms other than carbon, in the ring. Depending upon the number of atoms present in the ring, they can be either five or six-membered. Examples of five-membered heterocyclic aromatic compounds include pyrrole, furan, thiophene, and imidazole. Pyrrole consists of one nitrogen atom having one lone pair of electrons. Furan and thiophene have one oxygen and one sulfur heteroatom,...
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Electrophilic Aromatic Substitution: Fluorination and Iodination of Benzene01:13

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Bromination and chlorination of aromatic rings by electrophilic aromatic substitution reactions are easily achieved, but fluorination and iodination are difficult to achieve. Fluorine is so reactive that its reaction with benzene is difficult to control, resulting in poor yields of monofluoroaromatic products. To address this, Selectfluor reagent is used as a fluorine source in which a fluorine atom is bonded to a positively charged nitrogen.
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Woodward–Hoffmann Selection Rules and Microscopic Reversibility01:34

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Electrocyclic reactions, cycloadditions, and sigmatropic rearrangements are concerted pericyclic reactions that proceed via a cyclic transition state. These reactions are stereospecific and regioselective. The stereochemistry of the products depends on the symmetry characteristics of the interacting orbitals and the reaction conditions. Accordingly, pericyclic reactions are classified as either symmetry-allowed or symmetry-forbidden. Woodward and Hoffmann presented the selection criteria for...
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¹H NMR of Conformationally Flexible Molecules: Temporal Resolution00:52

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At room temperature, the chair conformer of cyclohexane undergoes rapid ring flipping between two equivalent chair conformers at a rate of approximately 105 times per second. These two chair conformers are in equilibrium. The rapid ring flipping results in the interconversion of the axial proton to an equatorial proton and an equatorial to the axial proton. Such interconversions are too rapid and cannot be detected on the NMR timescale. Hence, the NMR spectrometer cannot distinguish between the...
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Photochemical Electrocyclic Reactions: Stereochemistry01:26

Photochemical Electrocyclic Reactions: Stereochemistry

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The absorption of UV–visible light by conjugated systems causes the promotion of an electron from the ground state to the excited state. Consequently, photochemical electrocyclic reactions proceed via the excited-state HOMO rather than the ground-state HOMO. Since the ground- and excited-state HOMOs have different symmetries, the stereochemical outcome of electrocyclic reactions depends on the mode of activation; i.e., thermal or photochemical.
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Electrophilic Addition of HX to 1,3-Butadiene: Thermodynamic vs Kinetic Control01:23

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The addition of a hydrogen halide to 1,3-butadiene gives a mixture of 1,2- and 1,4-adducts. Since more substituted alkenes are more stable, the 1,4-adduct is expected to be the major product. However, the product distribution is strongly influenced by temperature; low temperature favors the 1,2-adduct, whereas the 1,4-adduct is predominant at high temperature.
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El control de la rotación intramolecular con heterociclos de cinco miembros facilita el diseño de sondas

Shahi Imam Reja1, Yuichiro Hori2, Youhei Takeda3

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Los investigadores desarrollaron nuevas sondas fluorogénicas utilizando anillos de furano o tiofeno para mejorar las imágenes de células vivas. Estas sondas ofrecen altas relaciones señal-ruido y especificidad del objetivo sin lavado, lo que permite la visualización de procesos celulares y objetivos como el EGFR.

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Área de la Ciencia:

  • Biología Química
  • Imágenes moleculares
  • Biotecnología

Sus antecedentes:

  • Las sondas fluorogénicas son cruciales para las imágenes biológicas sensibles y libres de fondo.
  • Las sondas existentes se enfrentan a desafíos en la relación señal-ruido, la especificidad y la permeabilidad de las células para aplicaciones sin lavado.

Objetivo del estudio:

  • Diseñar una nueva clase de fluoróforos fluorogénicos con mejor rendimiento para imágenes de células vivas.
  • Desarrollar sondas versátiles para diversos objetivos y aplicaciones celulares.

Principales métodos:

  • Incorporación de heterociclos de cinco miembros (furano, tiofeno) en el núcleo de xanteno para controlar la rotación intramolecular.
  • Diseño y síntesis de fluoróforos de carborodamina y rodamina de silicio sustituidos por furano y tiofeno.
  • Conjugación de fluoróforos con etiquetas de proteínas autoetiquetadas (HaloTag, etiqueta SNAP, etiqueta PYP) y inhibidores dirigidos (JQ1, gefitinib/erlotinib).

Principales resultados:

  • Se logra la activación de la fluorescencia independiente del equilibrio de la espirolactona mediante rotación intramolecular controlada.
  • Desarrolló sondas de alta permeabilidad sin lavar para HaloTag, SNAP-tag y PYP-tag, lo que permite la visualización de la dinámica del retículo endoplasmático.
  • Se han creado sondas de orientación de BRD4 y EGFR que demuestran una detección efectiva de la sobreexpresión de EGFR.

Conclusiones:

  • Una estrategia de diseño versátil basada en la rotación intramolecular controlada de los heterociclos produce sondas fluorogénicas innovadoras OFF / ON.
  • Este enfoque proporciona una plataforma robusta para la obtención de imágenes selectivas de células vivas sin lavado de diversos objetivos biológicos.