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Updated: Jul 15, 2026

The Use of Reverse Phase Protein Arrays RPPA to Explore Protein Expression Variation within Individual Renal Cell Cancers
Published on: January 22, 2013
Una firma de piroptosis basada en patómica predice la supervivencia en el carcinoma de células claras del riñón
Kaibin Wang1,2, Shiyao Wei3, Dingkun Hou1,2
1Department of Oncology, The Second Hospital of Tianjin Medical University, Tianjin, China.
Abstract:
Better prognostic tools are needed to improve the clinical management of clear cell renal cell carcinoma (ccRCC). To address this, we developed a novel prognostic model by integrating pathomics features with pyroptosis-related signaling, a strategy not previously explored in ccRCC. Analysis of The Cancer Genome Atlas (TCGA) whole-slide images identified 59 quantitative image features significantly correlated with a pyroptosis gene set. Based on these features, a prognostic risk score was developed using the StepCox[forward]+Lasso algorithm and validated as an independent predictor of patient survival. This model demonstrated robust predictive performance, with time-dependent AUCs of 0.744, 0.729, and 0.716 for 1-, 3-, and 5-year survival and C-indexes of 0.71 and 0.64 in the training and validation sets. This model implicates key pyroptosis-related genes (e.g., GSDMD, GSDME, CASP5, and several CHMP family genes), whose expression links pathological phenotypes to patient outcomes. Single-cell sequencing revealed their specific expression patterns in the ccRCC microenvironment, and functional exploration highlighted GSDMD's potential role. By providing a novel, biologically integrated signature, this model offers a refined tool for prognostic assessment that complements conventional clinical parameters. Ultimately, this pyroptosis-based pathomics model could help guide personalized treatment strategies for ccRCC patients in the future.
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