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Prospecting Microbial Strains for Bioremediation and Probiotics Development for Metaorganism Research and Preservation
Published on: October 31, 2019
Methylobacterium synurae sp. nov., aislada de un alga de agua dulce Synura petersenii
Yeong Ung Yu1, Si Hyeon Lee2, Che Ok Jeon2
1Department of Biological Sciences and Biotechnology, Hannam University, Jeonmin-dong, Yuseong-gu, Daejeon 34430, Republic of Korea.
Abstract:
A Gram-stain-negative, strictly aerobic and motile rod, designated strain SyP6RT, was isolated from the freshwater alga Synura petersenii in Nakdong River, Republic of Korea, representing a niche expansion of Methylobacterium to the algae. Colonies were pink-coloured, convex and circular on Reasoner's 2A agar. Phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain SyP6RT formed a distinct phyletic lineage within the genus Methylobacterium, showing the highest similarity to Methylobacterium platani PMB02T (98.9%). Genomic G+C content was 69.6 mol%, and phylogenomic analysis supported its distinct phyletic lineage. The average nucleotide identity values (89.2-89.6%) and digital DNA-DNA hybridization values (36.3-38.2%) with the closely related taxa were clearly below the species delineation thresholds. Notably, strain SyP6RT possesses biosynthetic genes for B vitamins, including thiamine, riboflavin, pantothenate and folate, highlighting its potential ecological role as a vitamin-supplying symbiont. Strain SyP6RT was oxidase-positive and catalase-negative, growing optimally at 30 °C and pH 7.0 and 0.25% (w/v) NaCl. Strain SyP6RT possessed ubiquinone-10 as the sole respiratory quinone and C16:0, summed feature 5 (comprising C18:0 ante and/or C18:2 ω6,9c), C18:0, summed feature 3 (comprising C16:1 ω7c and/or C16:1 ω6c) and summed feature 8 (comprising C18:1 ω7c and/or C18:1 ω6c) as the major cellular fatty acids (>5%). The predominant polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine and an unidentified aminolipid. Based on polyphasic evidence, strain SyP6RT represents a novel species of the genus Methylobacterium, for which the name Methylobacterium synurae sp. nov. is proposed. The type strain is SyP6RT (=KACC 19923T=JCM 33308T).
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