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CLCtips: Una plataforma integrada de puntas de pipeta para proteómica de vesículas extracelulares de alta eficiencia
Hongkun Zhu1, Xiaofei Chen1, Wei Liu1
1Department of Chemistry and Institutes of Biomedical Sciences, Fudan University, Shanghai 200433, China.
Abstract:
Current extracellular vesicles (EVs) isolation and proteomics preprocessing workflows are often complex, time-consuming, and costly and frequently rely on specialized equipment. Here, we present an integrated Capture-Lysis-Capture pipette-tips (CLCtips) platform that combines CD63-aptamer-mediated capture of EVs with epoxy-based protein immobilization and on-tip digestion. In our workflow, EVs-enriched fractions are first obtained from plasma, urine, and cerebrospinal fluid (CSF) by short size-exclusion chromatography and are then processed in CLCtips. This single-tip platform seamlessly integrates EVs enrichment, lysis, protein immobilization, and digestion into a 3 h workflow that requires only standard centrifugation equipment. The CLCtips were further applied to EVs-enriched fractions extracted from different biofluids, demonstrating high sensitivity by identifying an average of 2,388 proteins from 1 μL plasma, 1,034 proteins from 10 μL CSF, and 2,535 proteins from 20 μL urine (n = 3). The easy-to-use CLCtips process minute volumes with consumables costing below $1.2 per sample, and its modular architecture allows for customization with alternative affinity ligands, suggesting broad applicability in biomedical research areas.
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