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Updated: Feb 28, 2026

Neutron Crystallography Data Collection and Processing for Modelling Hydrogen Atoms in Protein Structures
Published on: December 1, 2020
Refinamiento Periódico de Átomos de Hirshfeld
Kanghyun Chu1, Dylan Jayatilaka2,3, Lorraine A Malaspina1
1Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, Freiestrasse 3, 3012 Bern, Switzerland.
Abstract:
Hirshfeld Atom Refinement (HAR) is a quantum crystallographic method for analyzing single-crystal X-ray diffraction data, providing accurate and precise structural parameters. Despite its success in predicting hydrogen-atom parameters, the application of HAR is fundamentally limited to molecular crystals. Inspired by two recently developed HAR versions that employ periodic-boundary conditions, here we introduce a new variant of periodic HAR (pHAR) that is applicable to any periodic-network structure while remaining compatible with conventional HAR by using atom-centered Gaussian orbitals with a Bloch wave formalism. pHAR was tested against high-quality single-crystal diffraction data for boranes and borates comprising N-H and B-H bonds in different chemical environments. The results demonstrate a close agreement of X-H bond lengths with reference data from neutron-diffraction experiments with improved precision. Using pHAR, this study has nearly doubled the previously available body of reliable experimental structural data on B-H bonds.
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