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CAPRRESI: Chimera Assembly by Plasmid Recovery and Restriction Enzyme Site Insertion
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コード配列での転写の抑制は,アルキル化ポリアミドによるものです
Takanori Oyoshi1, Wakana Kawakami, Akihiko Narita
1Division of Biofunctional Molecules, Institute of Biomaterials and Bioengineering, Tokyo Medical and Dental Univ., Chiyoda, Tokyo 101-0062, Japan.
Journal of the American Chemical Society
|April 17, 2003
まとめ
DNAをアルキル化するヘアピンポリアミドは,遺伝子転写を抑制することができます. この研究は,ヘアピンポリアミド (ImPyPy-gamma-ImPyLDu86) による特定のDNAアルキレーションが,完全な長さのmRNA合成を効果的に停止し,断片化されたバージョンを生成することを示しています.
科学分野:
- 分子生物学は分子生物学である.
- 化学生物学 化学生物学とは
- 遺伝学 遺伝学とは
背景:
- DNAアルキレーションは,遺伝物質を改変するための重要なメカニズムです.
- ヘアピンポリアミドは,特定のDNA配列に結合できる分子です.
- DNA修飾剤が遺伝子発現にどのように影響するかを理解することは,治療の開発に不可欠です.
研究 の 目的:
- ヘアピンポリアミドによるDNA配列特異性アルキル化が転写に及ぼす影響を調査する.
- コーディング領域内のアルキル化が遺伝子発現を抑制できるかどうかを判断する.
- 転写阻害剤としてのアルキル化ポリアミドの可能性を評価する.
主な方法:
- 高解像度のポリアクリラミドゲル電泳により,DNAアルキル化およびmRNA産物を分析する.
- 特殊なヘアピンポリアミド (ImPyPy-gamma-ImPyLDu86) とその水解微生物の合成と使用.
- GFPをコードする配列を含むDNA断片を用いたインビトロトランスクリプションアッセイ.
主要な成果:
- ヘアピンポリアミドは,コード化および非コード化鎖の両方の特定の場所に993-bpのDNA断片をアルキル化しました.
- DNAアルキル化により,全長mRNAの形成が阻害され,切断されたmRNAの生成につながった.
- 全長mRNA合成の完全な阻害は,ポリアミドの50nMで観察されました.
- 水解され,アルキル化しない誘導体は,転写を有意に抑制しませんでした.
結論:
- アルキル化ヘアピンポリアミドは,特定のDNA配列をターゲットにすることで,転写を効果的に阻害することができます.
- この抑制は,アルキル化部位が遺伝子のコーディング領域内に存在する場合でも発生します.
- アルキル化ポリアミドは,遺伝子発現を制御するための潜在的な戦略です.
関連する概念動画
Transcription
Overview
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
Chromatin Structure Regulates pre-mRNA Processing
In eukaryotic cells, nascent mRNA transcripts need to undergo many post-transcriptional modifications to reach the cell cytoplasm and translate into functional proteins. For a long time, transcription and pre-mRNA processing were considered two independent events that occur sequentially in the cell. However, it has now been well established that transcription and pre-mRNA processing are two simultaneous processes that are precisely regulated inside the cell.
The chromatin structure, especially...
The chromatin structure, especially...
Eukaryotic Transcription Inhibitors
Certain biochemical processes, such as embryonic development and cell growth regulation, depend on the repression of specific genes. DNA binding proteins known as eukaryotic transcription inhibitors regulate the repression of gene expression in eukaryotes. The presence of these inhibitors at the required location and time in the cell is triggered by the presence of hormones and additional signals from other cells.
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...
Eukaryotic transcription inhibitors usually contain two distinct domains, a DNA...
Transcription Attenuation in Prokaryotes
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure. Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
Bacterial Transcription
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription
Transcription is the synthesis of RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in correctly synthesizing messenger RNA (mRNA). Transcriptional regulation is responsible for the differentiation of different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...

