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偽の3'-UTRは異常終結を促進し,ナンセンス媒介のmRNA崩壊を誘発する
Nadia Amrani1, Robin Ganesan, Stephanie Kervestin
1Department of Molecular Genetics and Microbiology, University of Massachusetts Medical School, Worcester, Massachusetts 01655-0122, USA.
Nature
|November 5, 2004
まとめ
Nonsense-mediated decay (NMD) は,早すぎる翻訳終了によって引き起こされます. 3'-UTR構成に依存する早期停止コドンにおける異常なリボソームの行動は,mRNAの安定性に影響を与えます.
科学分野:
- 分子生物学は分子生物学である.
- 遺伝学 遺伝学とは
- RNA 生物学 RNA 生物学
背景:
- 無意味な媒介によるメッセンジャーRNA崩壊 (NMD) は,異常なトランスクリプトを除去します.
- 早期の翻訳終了と通常の翻訳終了を区別する正確なメカニズムは不明のままです.
- 現在のモデルでは,衰退因子や終末異常がNMDを誘発するかどうか議論されています.
研究 の 目的:
- 早期終結のコドンにおけるリボソームの行動を調査するために.
- NMDの規制における3 - 未翻訳領域 (UTR) の役割を明らかにする.
- mRNA監視の分子基礎を理解するために.
主な方法:
- プライマー拡張阻害 (トープリント) アッセイで,リボソームの位置をマップする.
- 主要なNMD因子 (Upf1p) を含むおよび含まない酵母抽出物の分析.
- 3 -UTR機能を模倣するために,テテードされたポリ (A) 結合タンパク質 (Pab1p) を用いた実験.
主要な成果:
- 早期終結コドン (UAA,UGA) は,リボソームの停滞と酵母抽出物の上流移動を引き起こします.
- この異常なリボソームの行動は,ナンセンス・コドン認識に依存している.
- 異常は,NMD因子Upf1pを除去するか,機能的な3 -UTRミミック (Pab1p) を提供することによって解決されます.
結論:
- 早期に翻訳を終了することは,本質的に異常です.
- 効率的な終結とmRNAの安定性は,適切な3 -UTR構成に依存しています.
- 3 -UTRは,終結因子の徴募とトランスクリプトの安定化において重要な役割を果たします.
関連する概念動画
Nuclear Export of mRNA
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
mRNA Stability and Gene Expression
The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
Cis-acting Elements involved in mRNA stability
Nuclear Export of mRNA
Before mRNAs are exported to the cytoplasm, it is crucial to check each mRNA for structural and functional integrity. Eukaryotic cells use several different mechanisms, collectively known as mRNA surveillance, to look for irregularities in mRNAs. Irregular or aberrant mRNA are rapidly degraded by various enzymes. If a defective mRNA escapes the surveillance, it would be translated into a protein which would either be non-functional or not function properly. One of the primary irregularities in...
Nonsense-mediated mRNA Decay
The Upf proteins that carry out nonsense-mediated decay (NMD) are found in all eukaryotic organisms, including humans. Each protein has an individual role, but they need to work in collaboration. Upf1 is an ATP-dependent RNA helicase that unwinds the RNA helix. Because Upf1 can unwind any RNA, Upf2 and Upf3 are required to help Upf1 discriminate between nonsense and normal mRNAs.
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
Usually, Upf3 binds to an Exon Junction Complex (EJC) at mRNA splice sites. If a ribosome fully translates the mRNA,...
mRNA Stability and Gene Expression
The structure and stability of mRNA molecules regulates gene expression, as mRNAs are a key step in the pathway from gene to protein. In eukaryotes, the half-life of mRNA varies from a few minutes up to several days. mRNA stability is essential in growth and development. The absence of the proteins regulating its stability, such as tristetraprolin in mice, can cause systemic issues, including bone marrow overgrowth, inflammation, and autoimmunity.
Cis-acting Elements involved in mRNA stability
Cis-acting Elements involved in mRNA stability

