ヒトのタンパク質とタンパク質の相互作用ネットワーク:プロテオームの注釈のためのリソース.
Ulrich Stelzl1, Uwe Worm, Maciej Lalowski
1Max Delbrueck Center for Molecular Medicine, 13092 Berlin-Buch, Germany.
Cell
|September 20, 2005
まとめ
この研究では,酵母2ハイブリッドスクリーニングを使用して,ヒトのタンパク質とタンパク質の相互作用を体系的にマッピングし,3186の相互作用の大きなネットワークを明らかにしました. 高信頼性の相互作用が特定され,細胞経路とタンパク質の機能に関する新しい洞察を明らかにしました.
科学分野:
- プロテオミクス プロテオミクスは,プロテオミクスの
- システム生物学 システム生物学
- 分子生物学は分子生物学である.
背景:
- タンパク質とタンパク質の相互作用 (PPI) は,細胞のプロセスとタンパク質の組織を理解するために不可欠です.
- PPIの体系的なマッピングは,機能的なネットワークの包括的な見方を提供します.
研究 の 目的:
- 人間のタンパク質の相互作用するペアを体系的に識別する.
- 大規模で高度に接続されたヒトのタンパク質とタンパク質の相互作用ネットワークを構築する.
- 新しいタンパク質の相互作用と,細胞経路におけるそれらの役割を特定する.
主な方法:
- 自動酵母2ハイブリッド (Y2H) 相互作用交配は,4456の餌と5632の獲物のマトリックスをスクリーニングするために使用されました.
- 独立のプルダウンおよび共免疫プレシピテーションアッセイが検証に使用されました.
- トポロジカルおよび遺伝子オントロジー (GO) 基準は,高信頼性相互作用をスコアおよび定義するために適用されました.
主要な成果:
- 1705のタンパク質を含む3186の,主に新しいPPIを特定し,大規模で高度に接続されたネットワークを形成しました.
- Y2H相互作用の全体的な品質を独立したアッセイで検証しました.
- 401のタンパク質の間で,911の高信頼性相互作用を定義しました.
- 2つの検証されたアシン-1相互作用を含む,未定のタンパク質と疾患タンパク質を調節経路にリンクする新しい相互作用を発見しました.
結論:
- 系統的なPPIスクリーンは,タンパク質の機能と細胞のプロセスを理解するのに有効です.
- 生成されたヒトPPIネットワークは,さらなる生物学的研究のための貴重なリソースを提供します.
- Wnt信号伝達の新しい調節剤を特定し,疾患に関連する経路分析におけるPPIマッピングの有用性を強調した.
関連する概念動画
Protein-protein Interfaces
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a polypeptide...
Protein Complexes with Interchangeable Parts
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Protein Networks
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
Protein-Protein Interfaces
Many proteins form complexes to carry out their functions, making protein-protein interactions (PPIs) essential for an organism's survival. Most PPIs are stabilized by numerous weak noncovalent chemical forces. The physical shape of the interfaces determines the way two proteins interact. Many globular proteins have closely-matching shapes on their surfaces, which form a large number of weak bonds. Additionally, many PPIs occur between two helices or between a surface cleft and a polypeptide...
Protein Complexes with Interchangeable Parts
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order to...
Protein Networks
An organism can have thousands of different proteins, and these proteins must cooperate to ensure the health of an organism. Proteins bind to other proteins and form complexes to carry out their functions. Many proteins interact with multiple other proteins creating a complex network of protein interactions.
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...
These interactions can be represented through maps depicting protein-protein interaction networks, represented as nodes and edges. Nodes are circles that are representative of a protein,...


