EmrE マルチドラッグトランスポーターのX線構造は,基板との複合体で
Owen Pornillos1, Yen-Ju Chen, Andy P Chen
1Department of Molecular Biology, The Scripps Institute, 10550 North Torrey Pines Road, CB-105, Jolla, CA 92037, USA.
まとめ
EmrEはE. coliの多剤輸送体であり,薬物を排出するために非対称な構造を使用しています. そのユニークなダイマーアーキテクチャは,陽子依存メカニズムを通じて片方向の輸送を促進します.
科学分野:
- 構造生物学 構造生物学とは
- 分子微生物学 分子微生物学
- バイオケミストリー バイオケミストリー
背景:
- EmrEは,Small Multidrug Resistance (SMR) 家族の主要なトランスポーターである.
- これは,Escherichia coli.の内膜から,陽性電荷の水害剤を積極的に排出する.
- EmrEのメカニズムを理解することは,多剤耐性との闘いにおいて極めて重要です.
研究 の 目的:
- EmrEトランスポーターのX線結晶構造を決定する.
- 基板結合と輸送の構造的基礎を解明する.
- 陽子に依存した流出メカニズムのモデルを提案する.
主な方法:
- 3.7アングストームの解像度のX線結晶学.
- EmrEと基質テトラフェニルフォスフォニウムとの共結晶化.
- EmrE基板複合体の構造分析.
主要な成果:
- 結晶構造は EmrE を二重化界面でホモディメア型トランスポーター結合基質として示しています.
- ダイマーは非対称であり,サブユニットは反対の膜方向とわずかに異なる折りたたみを持っています.
- この非対称なアーキテクチャは,一方的な転位経路を生み出します.
結論:
- EmrEの非対称な反並列二元構造は,その片方向の薬物輸送の鍵です.
- 構造データに基づいて,陽子に依存した流出メカニズムのモデルが提案されています.
- この研究は,SMRトランスポーターの機能に関する重要な洞察を提供します.
関連する概念動画
ABC Transporters: Exporter
ATP-binding cassette or ABC transporter is the largest superfamily of integral membrane proteins. The transporters have transmembrane-binding domains (TMDs) and nucleotide-binding domains (NBDs). The TMDs are specific to their substrates, whereas the NBDs are similar to engines that complete ATP hydrolysis to complete the substrate transport. They can be full transporters consisting of two TMDs and NBDs, half transporters with one TMD and NBD, while some encoded with a single TMD or NBD are...
ER Retrieval Pathway
In the secretory pathway, vesicles transport proteins from one cellular compartment to another in forward transport to deliver the protein to its correct location. Occasionally, misfolded proteins and incorrect proteins escape their original compartments, and a retrieval pathway is used to return the escaped proteins to their original compartment.
The ER uses many checkpoints to prevent the entry of incorrectly folded or a resident protein as cargo onto a transport vesicle. These mechanisms...
The ER uses many checkpoints to prevent the entry of incorrectly folded or a resident protein as cargo onto a transport vesicle. These mechanisms...
Insertion of Multi-pass Transmembrane Proteins in the RER
The rough ER membrane synthesizes, assembles, and embeds transmembrane proteins in diverse topologies. These proteins function as transporters or channels and can remain in the ER membrane or are sent to the Golgi complex, lysosome, and cell membrane.
The multipass transmembrane proteins are the type IV integral membrane proteins with multiple topogenic sequences determining their spatial arrangement in the ER membrane. Nearly all multipass proteins lack a cleavable signal sequence and use...
The multipass transmembrane proteins are the type IV integral membrane proteins with multiple topogenic sequences determining their spatial arrangement in the ER membrane. Nearly all multipass proteins lack a cleavable signal sequence and use...
Export of Misfolded Proteins out of the ER
After folding, the ER assesses the quality of secretory and membrane proteins. The correctly folded proteins are cleared by the calnexin cycle for transport to their final destination, while misfolded proteins are held back in the ER lumen. The ER chaperones attempt to unfold and refold the misfolded proteins but sometimes fail to achieve the correct native conformation. Such terminally misfolded proteins are then exported to the cytosol by ER-associated degradation or ERAD pathway for...
Protein Translocation Machinery on the ER Membrane
The translocon complex situated on the ER membrane is the main gateway for the protein secretory pathway. It facilitates the transport of nascent peptides into the ER lumen and their insertion into the ER membrane.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the translocon complex.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the translocon complex.
Carrier-Mediated Transport
Carrier-mediated transport is a pivotal process in drug absorption, particularly for lipid-insoluble drugs, and encompasses facilitated diffusion and active transport. Facilitated diffusion allows drugs to move along their concentration gradient without energy expenditure, while active transport utilizes ATP to drive drug movement against this gradient.
Active transport involves two types of membrane-spanning transporters: uptake and efflux. Uptake transporters are expressed in the small...
Active transport involves two types of membrane-spanning transporters: uptake and efflux. Uptake transporters are expressed in the small...


