ラパミシン遺伝子群にコード化されたライシンサイクロデアミナーゼであるRapLによるパイプコリック酸のバイオシンセシス
Gregory J Gatto1, Michael T Boyne, Neil L Kelleher
1Department of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Boston, Massachusetts 02115, USA.
Journal of the American Chemical Society
|March 16, 2006
まとめ
この研究は,RapL酵素の有効性を検証しています.
科学分野:
- バイオケミストリー バイオケミストリー
- 自然製品バイオシンセシス 自然製品バイオシンセシス
- 酵素学 酵素学とは
背景:
- ラパミシン,FK506,FK520は重要な免疫抑制剤である.
- これらのマクロラクトン天然製品は,パイプコリック酸の残留物を含んでいます.
- ピペコリック酸は,ライシンサイクロデアミネーションによって生物合成されます.
研究 の 目的:
- パイプコリック酸の生物合成におけるRapL酵素の機能を調査する.
- ライシンサイクロデアミナ化の触媒機構を特徴づけるために.
- ライシンサイクロデアミナーゼの初のインビトロ特徴を明らかにする.
主な方法:
- RapL酵素の異質的な過剰発現と浄化.
- L-リジンとL-オルニチンを基質として使用した酵素分析.
- 機械的な詳細を確認するために,同位体でラベル付けされた基板.
- コファクター要件を決定するスペクトル分析.
主要な成果:
- RapLは,L-リジンをサイクロデアミネーションによってL-ピペコリック酸に成功的に変換します.
- この反応は,ニコチナミドアデニン・ディヌクレオチド (NAD+) との酸化還元触媒反応を伴う.
- RapLはL-オルニチンと比べて効率が低く,最適な活動のためにNAD+を必要とします.
- 機械学的な研究では,アミンの損失とアルファ炭素の水素保持が確認されました.
結論:
- RapLは,重要な免疫抑制剤の生物合成における重要な酵素である.
- この研究は,ライシンサイクロデアミネーションのメカニズムを明らかにしています.
- この研究は,このユニークな酵素変換におけるNAD+の役割を強調しています.
関連する概念動画
Conservative Site-specific Recombination and Phase Variation
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
Bacterial RNA Polymerase
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
Riboswitches
Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
Biosynthesis of Nucleic Acids
Nucleic acid biosynthesis is a fundamental biochemical process that produces the purine and pyrimidine nucleotides essential for DNA and RNA synthesis. This pathway maintains a balanced nucleotide pool, preventing imbalances that could jeopardize genetic integrity and cellular function. Given the crucial role of nucleotides, their synthesis is tightly regulated to ensure proper cellular homeostasis.Purine BiosynthesisThe biosynthesis of purine nucleotides begins with ribose-5-phosphate, a...
Coordination of Gene Expression Processes in Bacteria
The DNA replication, transcription, and translation processes are intricately coupled in bacteria, allowing efficient gene expression and rapid protein synthesis. While this physical and functional coordination is advantageous, it introduces challenges that bacteria overcome through specific regulatory mechanisms.Coupling of Replication, Transcription, and TranslationThe coupling of replication, transcription, and translation is a hallmark of bacterial gene expression. As the replisome unwinds...
Production of Pharmaceuticals
Industrial insulin production uses genetically engineered E. coli expressing a proinsulin gene controlled by a tryptophan promoter and containing a methionine linker for later cleavage. The cells also carry ampicillin resistance for selective growth. Seed cultures are stored at −80 °C and production begins by thawing a small amount to inoculate starter cultures, which are progressively scaled to a 50,000-L bioreactor. In the bioreactor, E. coli grow in nutrient-rich media under sterile, tightly...


