RNAポリメラーゼによる初期転写は,DNA絞りメカニズムを通過する
Achillefs N Kapanidis1, Emmanuel Margeat, Sam On Ho
1Department of Chemistry and Biochemistry and Department of Physiology, University of California, Los Angeles, CA 90095, USA. a.kapanidis1@physics.ox.ac.uk
まとめ
初期転写は,RNAポリメラーゼ (RNAP) がDNAを自己に引っ張る"絞り込み"メカニズムを使用し,代替モデルではありません. このプロセスは,プロモーターの脱出を駆動するストレスのある中間物質を形成します.
科学分野:
- 分子生物学は分子生物学である.
- バイオケミストリー バイオケミストリー
- 遺伝学 遺伝学とは
背景:
- トランスクリプションの開始は,基本的な生物学的プロセスです.
- RNAポリメラーゼ (RNAP) の初期における正確な動きを理解することは極めて重要です.
- 以前のモデルでは,初期転写時にRNAPの異なった転位メカニズムが提案されていた.
研究 の 目的:
- 初期転写のメカニズムを解明する.
- RNAポリメラーゼ (RNAP) のDNAに対する転位ダイナミクスを決定する.
- プロモーター脱出におけるDNAストレスの役割を調査する.
主な方法:
- 単一分子内の距離をモニタリングするために,光共振エネルギー転送 (FRET) を利用しました.
- 転写始動複合体の失敗した始動を研究した.
- RNAPがプロモーターDNAに相対する動きを分析した.
主要な成果:
- 初期転写は"絞り込み"メカニズムを経由して進行することを示した.
- 示されたRNAPは,プロモーターDNAに固定され,下流DNAをその活性センターに引っ張ります.
- RNAPの"一時的な遠征"や"インチワミング"のような代替メカニズムを排除した.
- DNAの解き放たれと圧縮のストレスを伴うストレスの中間物質を特定しました.
結論:
- 初期転写はRNAPDNAスクラッチを通じて発生する.
- トランスクリプションの開始時にストレスのある中間物質が蓄積される.
- この蓄積されたストレスは,RNAPプロモーターの脱出を容易にする.
関連する概念動画
Transcription
Overview
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
Bacterial RNA Polymerase
Unlike eukaryotes, bacteria use a single RNA Polymerase (RNAP) to transcribe all genes. The different subunits of bacterial RNAPhave distinct functions. The multisubunit structure of the bacterial RNAP helps the enzyme to maintain catalytic function, facilitate assembly, interact with DNA and RNA, and self-regulate its activity.
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
In most genes, the transcription site is a single base present upstream of the coding sequence. Though RNAP is a catalytically efficient enzyme, it does not recognize...
Transcription Elongation Factors
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
Bacterial Transcription
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription Initiation
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
Transcription
Transcription is the synthesis of RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in correctly synthesizing messenger RNA (mRNA). Transcriptional regulation is responsible for the differentiation of different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...


