ニュクレオチドと複製数の変動が遺伝子発現フェノタイプに与える相対的な影響
Barbara E Stranger1, Matthew S Forrest, Mark Dunning
1Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Hinxton, Cambridge, CB10 1SA, UK.
まとめ
この研究では,単核酸ポリモルフィズム (SNPs) やコピーナンバー変種 (CNVs) などの遺伝的変異と,その遺伝子発現への影響を調査した. SNP と CNV の両方が,複雑な人間の特徴や病気を理解するのに貢献します.
科学分野:
- 遺伝学 遺伝学とは
- ゲノミクスゲノミクスとは
- 分子生物学は分子生物学である.
背景:
- シングル・ヌクレオチド・ポリモルフィズム (SNP) は,疾患関連性について広く研究されています.
- 複製数変異 (CNVs) を含む構造的変異は,一般的な遺伝的変異としてますます認識されています.
研究 の 目的:
- 複雑な表型に対するCNVの寄与を評価する.
- 遺伝子発現レベルとSNPとCNVの関連性を分析する.
主な方法:
- 関連分析は,14,925のトランスクリプトで行われました.
- 国際ハップマッププロジェクトの個人データを使用した.
- シングル・ヌクレオチド・ポリモルフィズム (SNPs) とコピー・ナンバー・バリエーション (CNVs) の両方を分析した.
主要な成果:
- SNPは遺伝子発現における遺伝的多様性の83.6%を説明した.
- CNVは遺伝子発現における遺伝的多様性の17.7%を占めた.
- SNPとCNVの遺伝信号は重複がほとんどないことを示した.
結論:
- SNPとCNVは,遺伝子発現における遺伝的多様性に大きく貢献しています.
- SNPとCNVの両方を調査することは,複雑なヒトの現象型と疾患を理解するために不可欠です.
- 総合的なゲノム調査は,病気の原因を明らかにする鍵です.
関連する概念動画
Mutations
Overview
What is Gene Expression?
Overview
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Gene expression is the process in which DNA directs the synthesis of functional products, that is, proteins. Cells can regulate gene expression at various stages. It allows organisms to generate different cell types and enables cells to adapt to internal and external factors.
Genetic Information Flows from DNA to RNA to Protein
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is made up of nucleotides and proteins consist of amino...
Gene Evolution - Fast or Slow?
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
Comparing Copy Number Variations and SNPs
Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Mutations
Mutations are changes in the sequence of DNA. These changes can occur spontaneously or they can be induced by exposure to environmental factors. Mutations can be characterized in a number of different ways: whether and how they alter the amino acid sequence of the protein, whether they occur over a small or large area of DNA, and whether they occur in somatic cells or germline cells.
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
Chromosomal Alterations Are Large-Scale Mutations
While point mutations are changes in a single nucleotide in...
What is Gene Expression?
A gene is a stretch of DNA that serves as the blueprint for functional RNAs and proteins. Since DNA is comprised of nucleotides and proteins are comprised of amino acids, a mediator is required to convert the information encoded in DNA into proteins. This mediator is the messenger RNA (mRNA). mRNA copies the blueprint from DNA by a process called transcription. In eukaryotes, transcription occurs in the nucleus by complementary base-pairing with the DNA template. The mRNA is then processed and...


