関連する実験動画
Updated: Jul 10, 2026

13:10
Use of Alu Element Containing Minigenes to Analyze Circular RNAs
Published on: March 10, 2020
Cyanidioschyzon merolaelaeにおける円形のRNA中間体を通して発現するパーミューテッドtRNA遺伝子は,
Akiko Soma1, Akinori Onodera, Junichi Sugahara
1Department of Life Science, College of Science, Rikkyo (St. Paul's) University, Toshima, Tokyo 171-8501, Japan.
まとめ
研究者らは,赤い藻類に異常なトランスファーRNA (tRNA) 遺伝子を発見した. これらの遺伝子は,半分が逆転した状態で,処理のためのユニークな円形のRNA中間経路を通過します.
科学分野:
- 分子生物学は分子生物学である.
- ゲノミクスゲノミクスとは
- 赤藻 生物学 赤い藻 生物学
背景:
- モデルとなる赤藻であるCyanidioschyzon merolaeの核ゲノムを計算分析した.
- 転送RNA (tRNA) 遺伝子はタンパク質合成に不可欠であり,特定のアミノ酸をリボソームに運ぶ.
- 遺伝子の組織と処理経路は,異なる生物間で大きく異なる可能性があります.
研究 の 目的:
- 赤藻Cyanidioschyzon merolae.の異常な転送RNA (tRNA) 遺伝子構造を特定し,特徴づけること.
- これらの特定されたtRNA遺伝子の発現と処理を調査する.
- これらの遺伝子のtRNA成熟に関与する新しい分子機構を解明する.
主な方法:
- Cyanidioschyzon merolaeの核ゲノムを計算分析した.
- 分子生物学技術を用いた遺伝子発現の検証.
- 成熟経路を理解するためにtRNA処理中間物質の分析.
主要な成果:
- 11のトランスファーRNA (tRNA) 遺伝子が特定され,その3'半分はゲノム内の5'半分より上流に位置しています.
- これらの遺伝子は活発に発現し,成熟したアミノアシレート型tRNAを生成します.
- 独特のtRNA処理経路が観察され,前駆者の端末の結合により,円形のRNA中間物質が形成された.
結論:
- Cyanidioschyzon merolaeは,逆の構造組織を持つユニークなtRNA遺伝子のセットを有しています.
- これらのtRNAの処理には,円形のRNA中間体を含む新しい経路が含まれています.
- この発見は,真核生物ゲノムにおける遺伝子組織とRNA処理の多様性を明らかにした.
関連する概念動画
Transfer RNA Synthesis
One of the unique features of tRNA is the presence of modified bases. In some tRNAs, modified bases account for nearly 20% of the total bases in the molecule. Altogether, these unusual bases protect the tRNA from enzymatic degradation by RNases.
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
Each of these chemical modifications is carried by a specific enzyme, post-transcription. All of these enzymes have unique base and site-specificity. Methylation, the most common chemical modification, is carried by at least nine different enzymes, with...
Export of Mitochondrial and Chloroplast Genes
A eukaryotic cell can have up to three different types of genetic systems: nuclear, mitochondrial, and chloroplast. During evolution, organelles have exported many genes to the nucleus; this transfer is still ongoing in some plant species. Approximately 18% of the Arabidopsis thaliana nuclear genome is thought to be derived from the chloroplast’s cyanobacterial ancestor, and around 75% of the yeast genome derived from the mitochondria’s bacterial ancestor. This export has occurred irrespective...
Insertion of Single-pass Transmembrane Proteins in the RER
Integral membrane proteins are proteins adhered to the lipid bilayer of a cell organelle or membrane. They can be of two types: transmembrane integral proteins that span the lipid bilayer and monotopic proteins that are attached to either side of the membrane but do not pass through it.
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
Regulated mRNA Transport
In eukaryotes, transcription and translation are compartmentalized; an mRNA is first synthesized in the nucleus and then selectively transported to the cytoplasm for protein synthesis. Before transport, a pre-mRNA undergoes several steps of post-transcriptional modifications including splicing, 5' capping, and the addition of a poly-adenine tail. Various proteins bind to the pre-mRNA during these modifications. The mRNA transport takes place with the help of multiple proteins playing specific...
Reporter Genes
Reporter genes are a type of protein-coding gene that are often tagged to a gene of interest. Once inside a target cell, reporter genes usually produce visually identifiable characteristics like fluorescence and luminescence when expressed along with the gene of interest. Thus, reporter genes “report” the presence or absence of genes of interest in an organism, determine the gene expression pattern, or track the physical location of a DNA segment or protein in the cell.
Commonly used reporter...
Commonly used reporter...
Translational Regulation
Translational regulation in prokaryotes ensures efficient protein synthesis by controlling ribosome access to mRNA. This regulation is mediated by secondary RNA structures, including translational riboswitches, RNA thermometers, and small RNAs (sRNAs), which respond to intracellular and environmental signals to modulate gene expression.Translational RiboswitchesRiboswitches in the leader region of mRNAs can regulate translation by altering the accessibility of the Shine-Dalgarno (SD) sequence,...

