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Viral Mutations00:36

Viral Mutations

A mutation is a change in the sequence of bases of DNA or RNA in a genome. Some mutations occur during replication of the genome due to errors made by the polymerase enzymes that replicate DNA or RNA. Unlike DNA polymerase, RNA polymerase is prone to errors because it is not capable of “proofreading” its work. Viruses with RNA-based genomes, like HIV, therefore accrue mutations faster than viruses with DNA-based genomes. Because mutation and recombination provide the raw material for adaptive...
Gene Evolution - Fast or Slow?02:05

Gene Evolution - Fast or Slow?

The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
Leaky Scanning02:28

Leaky Scanning

During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
Genome Copying Errors02:46

Genome Copying Errors

DNA replication is a well-evolved process that copies millions of base pairs with high fidelity during each cell division. Occasionally a wrong base or a long stretch of wrong bases may get added to the daughter strands. If the errors are left unchecked, cells might accumulate several mutations that might endanger their  survival. Therefore, the copying errors are checked and repaired at three levels.
Mutations in Microorganisms01:18

Mutations in Microorganisms

Mutations are heritable changes in an organism’s genome involving alterations in the base sequence of DNA or RNA. These changes can influence cellular processes and phenotypic traits, potentially transforming the unaltered wild type into a mutant form. Such changes, termed forward mutations, are pivotal in shaping the genetic diversity of organisms.RNA viruses exhibit the highest mutation rates due to the absence of robust proofreading mechanisms during genome replication. In contrast,...
Point and Frameshift Mutations01:30

Point and Frameshift Mutations

Point mutations are genetic alterations involving the change of a single nucleotide base pair in DNA. Depending on how the alteration affects protein synthesis, they can lead to various consequences.Point mutations fall into the following types:Silent mutations occur when a nucleotide change does not alter the amino acid sequence due to the redundancy of the genetic code. For instance, changing ACC to ACA still encodes threonine, leaving the protein function unaffected. This occurs because...

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Updated: Jul 4, 2026

Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency
18:10

Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency

Published on: June 16, 2011

コドンペアバイアスのゲノムスケールの変化によるウイルスの衰弱.

J Robert Coleman1, Dimitris Papamichail, Steven Skiena

  • 1Department of Molecular Genetics and Microbiology, Stony Brook University, Stony Brook, NY 11794, USA.

Science (New York, N.Y.)
|June 28, 2008
PubMed
まとめ

科学者たちはコドンペアを変え,タンパク質の翻訳を遅らせてポリオウイルスを設計しました. この"千切りによる死"戦略は,ウイルスを弱体化させ,防御的な免疫のための潜在的なワクチン候補を生み出しました.

科学分野:

  • 遺伝学 遺伝学とは
  • ウイルス学 ウイルス学 ウイルス学
  • 分子生物学は分子生物学である.

背景:

  • 遺伝子コードの冗長性は,アミノ酸をコードする複数のコドンペアを可能にします.
  • 種別コドンペアのバイアスは,同義的なコドンペアの使用頻度に影響します.
  • コドン・ペア・バイアスの理解は,合成生物学とウイルスの衰弱に不可欠です.

研究 の 目的:

  • ウイルスのタンパク質翻訳と衰弱に対するコドンペアバイアスの影響を調査する.
  • 同義的なコドン操作を用いた新しいウイルス衰弱戦略を開発する.
  • エンジニアリングされたポリオウイルスの免疫性および保護効果を評価する.

主な方法:

  • 選択されたコドンペアでポリオウイルスカプシドタンパク質をコードする大型DNA分子のデノボ合成.
  • 代名詞で表記されすぎているコドンペアと表記されすぎているコドンペアの併用.
  • エンジニアリングウイルスにおけるタンパク質翻訳率の評価.
  • マウスの体内試験で,ウイルスの衰弱と保護性免疫を評価する.

主要な成果:

  • 代表が少ないコドンペアは,タンパク質変換率を大幅に低下させた.

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Following the Dynamics of Structural Variants in Experimentally Evolved Populations
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Following the Dynamics of Structural Variants in Experimentally Evolved Populations

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Isolation of Next-Generation Gene Therapy Vectors through Engineering, Barcoding, and Screening of Adeno-Associated Virus (AAV) Capsid Variants

Published on: October 18, 2022

関連する実験動画

Last Updated: Jul 4, 2026

Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency
18:10

Isolation of Fidelity Variants of RNA Viruses and Characterization of Virus Mutation Frequency

Published on: June 16, 2011

Following the Dynamics of Structural Variants in Experimentally Evolved Populations
04:52

Following the Dynamics of Structural Variants in Experimentally Evolved Populations

Published on: February 3, 2023

Isolation of Next-Generation Gene Therapy Vectors through Engineering, Barcoding, and Screening of Adeno-Associated Virus (AAV) Capsid Variants
09:20

Isolation of Next-Generation Gene Therapy Vectors through Engineering, Barcoding, and Screening of Adeno-Associated Virus (AAV) Capsid Variants

Published on: October 18, 2022

  • 改造されたコドンペアを持つ人工ポリオウイルスは,マウスで衰弱を示した.
  • パーソナライズされたポリオウイルスは,その後のウイルスの挑戦に対する保護的免疫を誘発しました.
  • この戦略は,ウイルス衰弱における広範な適用の可能性を示した.
  • 結論:

    • 同義的なコードンペアの使用は,タンパク質翻訳速度とウイルス衰弱に直接影響します.
    • コドン・ペア・バイアス・マニピュレーションは,弱体化されたウイルスワクチン候補を作成するための実行可能な戦略を提供します.
    • ほら,ほら,ほら,ほら
    • 千切りの傷による死.
    • このアプローチは,多様なウイルスの病原体を弱めるために有望であることが示されています.