関連する実験動画
Updated: Jun 21, 2026

10:46
Gene Digital Circuits Based on CRISPR-Cas Systems and Anti-CRISPR Proteins
Published on: October 18, 2022
転写制御回路:アルファベットから数字を予測する
Harold D Kim1, Tal Shay, Erin K O'Shea
1Howard Hughes Medical Institute, Harvard University Faculty of Arts and Sciences Center for Systems Biology, Department of Molecular and Cellular Biology, Cambridge, MA 02138, USA.
まとめ
研究者は,遺伝子発現を制御する転写制御回路をモデル化するための方法を検討しています. 小規模と大規模なアプローチを組み合わせることで,これらの遺伝子ネットワークの複雑な働きを明らかにすることができます.
科学分野:
- 分子生物学は分子生物学である.
- システム生物学 システム生物学
- バイオインフォマティックス
背景:
- 転写制御回路は,信号をメッセンジャーRNA (mRNA) レベルに統合することによって,遺伝子発現を制御する.
- 高通量技術の進歩により,膨大な量の遺伝子発現データが生成されます.
- これらの回路を理解することは,細胞機能の解読に不可欠です.
研究 の 目的:
- 転写制御回路のモデリングのための実験的および計算的方法をレビューする.
- 小規模および大規模モデリングのアプローチの統合について議論する.
- 遺伝子規制ネットワークの"働きと配線"を理解する可能性を強調する.
主な方法:
- 実験的および計算的方法に関する既存の文献のレビュー.
- 異なるスケールでの定量回路モデリングのテクニックの分析.
- 定量化および高通量技術によるデータ生成に関する議論.
主要な成果:
- 転写制御の定量モデルを構築するための多様な方法の特定.
- モデルを小規模 (詳細な回路) と大規模 (全ゲノム) のアプローチに分類する.
- 小規模と大規模のモデリング戦略の相乗効果を強調する.
結論:
- 詳細な小規模回路モデルとより広範な大規模モデルを組み合わせることで,強力なアプローチが提供されます.
- この統合戦略は,転写調節の複雑なメカニズムを解明することができます.
- 将来の研究は,これらの組み合わせた方法を活用して,遺伝子規制ネットワークを包括的にマッピングすることができます.
関連する概念動画
Cis-regulatory Sequences
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
Cis-regulatory Sequences
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
Combinatorial Gene Control
Combinatorial gene control is the synergistic action of several transcriptional factors to regulate the expression of a single gene. The absence of one or more of these factors may lead to a significant difference in the level of gene expression or repression.
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
The expression of more than 30,000 genes is controlled by approximately 2000-3000 transcription factors. This is possible because a single transcription factor can recognize more than one regulatory sequence. The specificity in gene...
Master Transcription Regulators
Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
Master Transcription Regulators
Master transcription regulators are regulatory proteins that are predominantly responsible for regulating the expression of multiple genes. Often these genes work in concert to drive a complex process. Activation of a master transcription regulator can lead to a cascade of transcriptional activation necessary for that outcome. These regulators can directly bind to the regulatory sequences of the various genes involved, or they can indirectly regulate transcription by binding to regulatory...
Transcription
Overview
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...

