集団レベルの転写サイクルは,単細胞転写のストキャスティックタイミングから派生する
Tatjana Degenhardt1, Katja N Rybakova, Aleksandra Tomaszewska
1Department of Biosciences, University of Kuopio, 70211 Kuopio, Finland.
Cell
|August 12, 2009
まとめ
この研究は,ヒストンの改変やRNAポリメラーゼII活性などの分子イベントによって引き起こされる,遺伝子転写の60分間のサイクルを明らかにしています. この固有の周期性は,集団レベルの遺伝子発現パターンを説明する.
科学分野:
- 分子生物学は分子生物学である.
- 遺伝学 遺伝学とは
- バイオフィジックス 生物物理学
背景:
- ユカリオットのトランスクリプションは,タンパク質に依存する複雑なプロセスです.
- 単一分子レベルで遺伝子発現のダイナミクスを理解することは極めて重要です.
研究 の 目的:
- 周期的な遺伝子転写の基礎となる分子機構をモデル化し理解する.
- 人間の細胞における転写関連のプロセスの周期性を調査する.
主な方法:
- 単一遺伝子の転写のための詳細なストキャスティックモデルを開発した.
- ピルバ酸脱水酸化酵素キナーゼ4遺伝子のサイクリング表現の測定.
- 拡散とタンパク質複合体のダイナミクスのための現実的な運動学を組み込みました.
主要な成果:
- ヒストンの改変,調節性タンパク質の存在,RNAポリメラーゼIIの活性,クロマチンのループ形成,mRNAの蓄積で約60分間の周期が観察されました.
- このモデルは,人口レベルでの転写サイクルにつながる単一遺伝子の活動のタイミングを正確に予測します.
- トランスクリプション開始の連続性および不可逆性の性質をキーとして特定しました.
結論:
- 転写プロセスの固有の周期性は,集団レベルでの遺伝子発現サイクルの主な原動力である.
- この研究は,遺伝子発現リズムに関する分子レベルの理解を提供します.
関連する概念動画
Structure of a Gene
A gene is the fundamental unit of heredity. Every individual has two copies of each gene, one inherited from each parent. Although most people contain the same genes, there is a small fraction that is slightly different amongst people. A gene with a small difference in its sequence of DNA bases forms different alleles, contributing to different phenotypes.
However, only 1% of the DNA is composed of genes that encode proteins; the rest, 99% is non-coding DNA. This non-coding DNA performs...
However, only 1% of the DNA is composed of genes that encode proteins; the rest, 99% is non-coding DNA. This non-coding DNA performs...
Transcription
Transcription is the synthesis of RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in correctly synthesizing messenger RNA (mRNA). Transcriptional regulation is responsible for the differentiation of different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
Transcription
Overview
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
Transcription is the process of synthesizing RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in the proper synthesis of messenger RNA (mRNA). Regulation of transcription is responsible for the differentiation of all the different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds...
Bacterial Transcription
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Circadian Rhythms and Gene Regulation
The biological clock is involved in many aspects of regulating complex physiology in all animals. It was in 1935 when German zoologists, Hans Kalmus and Erwin Bünning, discovered the existence of circadian rhythm in Drosophila melanogaster. However, the internal molecular mechanisms behind the circadian clock remained a mystery until 1984, when Jeffrey C. Hall, Michael Rosbash, and Michael W. Young discovered the expression of the Per gene oscillating over a 24-hour cycle. In subsequent years,...
General Transcription Factors
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...


