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Chromatin Immunoprecipitation from Human Embryonic Stem Cells
Published on: July 22, 2008
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胚の多能性のクロマチンシグネチャーは,ゲノム活性化中に確立される
Nadine L Vastenhouw1, Yong Zhang, Ian G Woods
1Department of Molecular and Cellular Biology, Harvard University, 16 Divinity Avenue, Cambridge, Massachusetts 02138, USA.
Nature
|March 26, 2010
まとめ
妊産婦と乳児のシゴティック・トランジションの間,H3K4me3やH3K27me3のような重要なヒストンの改変により,二価および一価のクロマチンのドメインが確立され,胚の遺伝子が活性化および多能性のために準備されます.
科学分野:
- 発達生物学 発達生物学について
- エピジェネティクス エピジェネティクス
- ゲノミクスゲノミクスとは
背景:
- 胚のゲノムは,受精後,母体から胎児への移行まで,転写的に静かである.
- 胚の発達と幹細胞の生成に不可欠な多能細胞は,この移行中に発生します.
- クロマチンのダイナミクスを理解することは,ゲノム活性化と多能性を解読する鍵です.
研究 の 目的:
- プラリポテンシーとゲノム活性化に関連したヒストントリメチル化マーク (H3K27me3とH3K4me3) の変化を調査する.
- ゼブラフィッシュにおける母性-ジゴティック移行の前と後のこれらの改変のゲノム位置をマッピングする.
主な方法:
- クロマチン免疫降水法 (ChIP) でヒストンH3ライシントリメチル化 (H3K27me3およびH3K4me3) をマッピングする.
- 2つのマークが同じプロモーター地域で共存するかどうかを判断するための連続的なChIP.
- 既存のデータセットと誘導可能なトランスゲンの分析により,遺伝子調節を研究する.
主要な成果:
- H3K27me3とH3K4me3は,母体から乳房への移行前に存在しなかった.
- トランジション後,80%以上の遺伝子がH3K4me3を取得し,多くの発達遺伝子はH3K4me3とH3K27me3の両方 (二価ドメイン) を示しています.
- 単独のH3K4me3 (単価ドメイン) を含む不活性遺伝子が特定され,RNAポリメラーゼII結合が欠けていた.
結論:
- 二対性および一対性クロマチンのドメインは,母性-ジゴティック移行の間に確立され,遺伝子の活性化に潜在的に準備されています.
- これらの発見は,多能性と初期の胚性遺伝子調節の基礎となるクロマチンの構造に光を当てています.
- H3K4me3は,配列特異の活性化剤と安定したRNAポリメラーゼII関連から独立して確立できます.
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