DNA結合因子は,マウスのメチロームを,遠隔の調節領域で形作る
Michael B Stadler1, Rabih Murr, Lukas Burger
1Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland.
Nature
|December 16, 2011
まとめ
DNA結合因子は,DNAメチル化パターンに影響を与え,活発な調節領域を作成します. この研究では,マウスメチロームをマッピングし,幹細胞とニューロンの祖先の細胞タイプ特有のパターンを明らかにしました.
科学分野:
- エピジェネティクスとゲノミクス
- 哺乳類ゲノム規制について
背景:
- サイトシンメチレーションは哺乳類における重要な表遺伝的メカニズムである.
- DNAメチル化パターンの正確な調節は完全に理解されていません.
研究 の 目的:
- DNAメチル化パターンを支配するルールを調査するために.
- DNAメチル化の影響を受ける規制領域を特定し,特徴づけること.
主な方法:
- 幹細胞とニューロンの祖先における塩基対解像度マウスメチロームの生成.
- 低メチル化地域 (LMR) を特定するための定量分析.
- DNase I過敏症,強化剤クロマチンの痕跡,および強化剤の活性に対する検査.
主要な成果:
- CpGに乏しい遠隔の規制要素として,LMR (平均30%メチル化) を特定する.
- DNA結合因子がLMRを占有し,その形成に必要かつ十分であることを示す.
- 細胞型特異の転写因子によって引き起こされる細胞型特異のLMRの確認.
結論:
- DNA結合因子は,DNAメチル化を局所的に制御する.
- このメカニズムは,活発な規制地域を特定することを可能にします.
- マウスゲノムのメチロームに関する包括的な参考文献を提供します.
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