PKA RIIβテトラメリックホロ酵素の構造とアロステリー
Ping Zhang1, Eric V Smith-Nguyen, Malik M Keshwani
1Howard Hughes Medical Institute, University of California, San Diego, La Jolla, CA 92093-0654, USA.
まとめ
サイクルアデノシンモノホスファート (cAMP) 依存タンパク質キナーゼ (PKA) RIIβ(2):C(2) ホロ酵素構造は,cAMP結合がアロステリックにPKAを活性化する方法を示しています. この構造は,PKAについての洞察を提供します.
科学分野:
- バイオケミストリー バイオケミストリー
- 構造生物学 構造生物学とは
- 分子生物学は分子生物学である.
背景:
- 循環性アデノシンモノホスファート (cAMP) 依存タンパク質キナーゼ (PKA) は,細胞プロセスを調節する重要な酵素です.
- PKAは,生理学的に,調節 (R) と触媒 (C) のサブユニットを含むテトラメアとして存在します.
研究 の 目的:
- 全長テトラメリックRIIβ(2):C(2) PKAホロ酵素の2.3アングストーム構造を決定する.
- 構造分析を通じて,cAMPによるアロステル活性化のメカニズムを解明する.
主な方法:
- 2.3アングストームの解像度のX線結晶学.
- RIIβ(2):C(2) ホロ酵素構造と核酸結合状態の分析.
主要な成果:
- RIIβ(2):C(2) ホロ酵素は,ダイマーのダイマーを形成し,RIIβとCサブユニット間のアンカリングインターフェースを明らかにします.
- RIIβサブユニットのβ4-β5ループの相互作用は,Cサブユニットを核酸のない閉じた形状に強制する.
- 結晶はATPの代わりに反応産物 (ADPとリン酸化RIIβ) を明らかにし,PKAサイクルへの影響を示唆した.
結論:
- 決定された構造は,PKAのcAMP媒介アロステリック活性化のためのメカニズム的基礎を提供します.
- RIIβテトレメアの四次構造はRIαテトレメアとは異なっており,PKAイソフォームの構造的な配置が異なることを示している.
関連する概念動画
Cooperative Allosteric Transitions
Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
Cooperative Allosteric Transitions
Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
Cooperative Allosteric Transitions
Cooperative allosteric transitions can occur in multimeric proteins, where each subunit of the protein has its own ligand-binding site. When a ligand binds to any of these subunits, it triggers a conformational change that affects the binding sites in the other subunits; this can change the affinity of the other sites for their respective ligands. The ability of the protein to change the shape of its binding site is attributed to the presence of a mix of flexible and stable segments in the...
Allosteric Proteins-ATCase
Binding sites linkages can regulate a protein's function. For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis pathway,...
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis pathway,...
ATP Synthase: Mechanism
In animals, the mitochondrial F1F0 ATP synthase is the key protein that synthesizes ATP molecules through a complex catalytic mechanism. While the nuclear genome encodes the majority of ATP synthase subunits, the mitochondrial genome encodes some of the enzyme's most critical components. The formation of this multi-subunit enzyme is a complex multi-step process regulated at the level of transcription, translation, and assembly. Defects in one or more of these steps can result in decreased ATP...
ATP Synthase: Structure
ATP synthase or ATPase is among the most conserved proteins found in bacteria, mammals, and plants. This enzyme can catalyze a forward reaction in response to the electrochemical gradient, producing ATP from ADP and inorganic phosphate. ATP synthase can also work in a reverse direction by hydrolyzing ATP and generating an electrochemical gradient. Different forms of ATP synthases have evolved special features to meet the specific demands of the cell. Based on their specific feature, ATP...


