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Updated: May 18, 2026

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Kinetic Measurement and Real Time Visualization of Somatic Reprogramming
Published on: July 30, 2016
細胞再プログラミング中の単細胞発現分析は,初期のストキャスティックと後期の階層的相を明らかにする
Yosef Buganim1, Dina A Faddah, Albert W Cheng
1The Whitehead Institute for Biomedical Research, Cambridge, MA 02142, USA.
Cell
|September 18, 2012
まとめ
単細胞分析は,細胞再プログラム中の重要な遺伝子発現のダイナミクスを明らかにします. Esrrb と Utf1 のような新しいマーカーは,より古いマーカーよりも,誘発性多能幹細胞 (iPSC) の進行をうまく予測します.
科学分野:
- 幹細胞生物学 幹細胞生物学とは
- 分子生物学は分子生物学である.
- 遺伝学 遺伝学とは
背景:
- 細胞の再プログラムにより,誘発性多能幹細胞 (iPSC) が生成されますが,通常は細胞のわずかな部分のみが関与します.
- 以前の研究では,大量の細胞集団を分析し,再プログラムイベントの単細胞解消を阻害しました.
研究 の 目的:
- 細胞再プログラム中に単細胞の遺伝子発現パターンを特定するために.
- 成功したiPSCの生成を予測する新しいマーカーを決定する.
- プラリポテンシー誘導を制御する遺伝子調節ネットワークの解明.
主な方法:
- 単細胞遺伝子発現プロファイリング 異なる再プログラム段階における48の遺伝子.
- 初期の再プログラミングと後期の再プログラミングの間の遺伝子発現パターンの比較分析.
- 主要な転写因子とその階層的な関係を特定する.
主要な成果:
- 初期の再プログラム段階では,細胞間での遺伝子発現の変動が顕著であり,後期段階では,より均一な発現を示します.
- Esrrb, Utf1, Lin28,およびDppa2は,Fbxo15,Fgf4,およびOct4.4と比較して,iPSCの運命を予測する優れた予測者である.
- 階層的な遺伝子発現モデルが生まれ,Sox2は後期段階のアップストリームレギュレータとして機能した.
- 中核の多能性要因を除く下流の要因は,多能性回路を活性化することができます.
結論:
- 単細胞分析は,細胞再プログラミングの異質性と動態に関する重要な洞察を提供します.
- 新しい遺伝子発現マーカーは,iPSCの生成の効率と予測を向上させることができます.
- Oct4,Sox2,Klf4,c-Myc,およびNanogから独立した階層的な遺伝子調節ネットワークが,多能性誘導を駆動する.
関連する概念動画
Somatic to iPS Cell Reprogramming
Reprogramming alters the gene expression in somatic cells, transforming them into induced pluripotent stem (iPS) cells over several generations. Scientists can reprogram cells by introducing genes for four transcription factors—Oct4, Sox2, Klf4, and c-Myc (OSKM) by viral or non-viral methods. These factors are also known as Yamanaka factors after Shinya Yamanaka, who first generated iPS cells using mouse skin cells. Yamanaka was awarded the Nobel Prize in Physiology or Medicine in 2012 for this...
Chromatin Modification in iPS Cells
Chromatin modification alters gene expression; therefore, scientists can add histone-modifying enzymes, histone variants, and chromatin remodeling complexes to somatic cells to aid reprogramming into pluripotent stem (iPS) cells.
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
Compact chromatin makes reprogramming difficult. Enzymes, such as histone demethylases and acetyltransferases, are often added during reprogramming to loosen the chromatin, making the DNA more accessible to transcription factors. Molecules that inhibit histone...
Methods of Nuclear Reprogramming
Nuclear reprogramming is a process of transforming one cell type into an unrelated cell type by epigenetic changes that alter the cell’s original gene expression pattern. Such epigenetic changes force cells to express a different set of genes, which play a significant role in inducing transformation into other cell types. Nuclear reprogramming offers applications in reproductive cloning for livestock propagation and regenerative medicine — developing patient-specific cells for injury repair.
Regulation of Expression Occurs at Multiple Steps
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression Occurs at Multiple Steps
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Regulation of Expression at Multiple Steps
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the addition of a...

