核受容体-共活性化器の相互作用の調節器としてのプロリンプライムヘリックス長さ
Sascha Fuchs1, Hoang D Nguyen, Trang T P Phan
1Laboratory of Chemical Biology, Department of Biomedical Engineering, Technische Universiteit Eindhoven, Den Dolech 2, 5612 AZ Eindhoven, The Netherlands.
Journal of the American Chemical Society
|February 27, 2013
まとめ
研究者は,核受容体に対する新しいPXLXXLLXXP結合コンセンサスを発見し,典型的なLXXLLモチーフを超えて理解を広げました. この発見は,遺伝子転写調節を標的とした薬剤の設計のための新しい構造的洞察を提供します.
科学分野:
- 分子生物学は分子生物学である.
- 構造生物学 構造生物学とは
- ドラッグ・ディスカバリー・ドリッグ・ディスカバリー・ドリッグ・ディスカバリー・ドラッグ・ディスカバリー・ドリッグ・ディスカバリー
背景:
- 核受容体共活性化剤の結合は,遺伝子転写に極めて重要です.
- 保存されたLXXLLモチーフは,この相互作用を媒介することが知られている.
- LXXLLを超えたシーケンスの特異性を理解することは,薬の開発に不可欠です.
研究 の 目的:
- 核受容体の新しいペプチド認識モチーフを特定する.
- コアクティベーター結合における側面残留物の役割を調査する.
- 核受容体-共活性剤の相互作用に関する構造的洞察を提供するため.
主な方法:
- リボソームディスプレイは,新しい結合モチーフをスクリーニングするために使用されました.
- 構造的な相互作用を分析するために分子モデリングが使用されました.
- X線結晶学により,高解像度の構造データが得られた.
主要な成果:
- 新しい,高度に進化したPXLXXLLXXPの拘束力のあるコンセンサスが発見されました.
- この研究は,α-ヘリックス形成と受容体相互作用における側面プロリンの役割を明らかにした.
- 受容体-共活性剤の相互作用を調節するための新しい構造パラメータが特定されました.
結論:
- PXLXXLLXXPモチーフは,既知の核受容体結合配列の重要な拡張を表しています.
- 構造的な洞察は,側面の残留物が受容体とのα-ヘリックス相互作用を最適化する方法を示しています.
- この発見は,核受容体媒介遺伝子調節のための標的型阻害剤の設計を容易にする.
関連する概念動画
Co-activators and Co-repressors
Gene transcription is regulated by the synergistic action of several proteins that form a complex at a gene regulatory site. This is observed in eukaryotes, where the regulation of gene expression is a complex process. Regulatory proteins in eukaryotes can broadly be classified into two types – regulators that bind directly to specific DNA sequences and co-regulators that associate with regulatory proteins but cannot directly bind to the DNA. These co-regulators are further divided into...
Co-activators and Co-repressors
Gene transcription is regulated by the synergistic action of several proteins that form a complex at a gene regulatory site. This is observed in eukaryotes, where the regulation of gene expression is a complex process. Regulatory proteins in eukaryotes can broadly be classified into two types – regulators that bind directly to specific DNA sequences and co-regulators that associate with regulatory proteins but cannot directly bind to the DNA. These co-regulators are further divided into...
Cooperative Binding of Transcription Regulators
Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome. Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form dimers that...
Cooperative Binding of Transcription Regulators
Transcriptional regulators bind to specific cis-regulatory sequences in the DNA to regulate gene transcription. These cis-regulatory sequences are very short, usually less than ten nucleotide pairs in length. The short length means that there is a high probability of the exact same sequence randomly occurring throughout the genome. Since regulators can also bind to groups of similar sequences, this further increases the chances of random binding. Transcriptional regulators form dimers that...
Covalently Linked Protein Regulators
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
These groups modify specific amino acids in a protein.
Covalently Linked Protein Regulators
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein.
These groups modify specific amino acids in a protein.


