関連する実験動画
Updated: Aug 15, 2026

10:37
Toeprinting Analysis of Translation Initiation Complex Formation on Mammalian mRNAs
Published on: May 10, 2018
延長因子EF-GとEF-Tuと23SRNAの保存ループの相互作用
D Moazed1, J M Robertson, H F Noller
1Thimann Laboratories, University of California, Santa Cruz 95064.
Nature
|July 28, 1988
まとめ
延長因子EF-GとEF-Tuは,細菌のタンパク質合成中にリボソームRNA (rRNA) と相互作用する. EF-Gは1,067と2,660のrRNA位置の近くで結合し,EF-Tuは2,660の位置の近くで相互作用する.
科学分野:
- 分子生物学は分子生物学である.
- リボソームの機能
- バクテリアのタンパク質合成
背景:
- 延長因子EF-TuとEF-Gはタンパク質合成に不可欠であり,それぞれtRNA配送と転位を媒介する.
- この2つの因子はリボソームと相互作用し,GTPasesであるが,リボソームRNA (rRNA) との直接の相互作用は,まだ完全に理解されていない.
- これらの相互作用を理解することは,翻訳のメカニズムと潜在的な薬物標的の解読の鍵です.
研究 の 目的:
- 延長因子EF-GとEF-TuとE. coliのリボソームRNAとの直接的な相互作用を調査する.
- 化学探査を用いて23S rRNAにおけるこれらの因子の特定の結合部位をマッピングする.
- これらの結合部位を,既知の機能領域と抗生物質の相互作用部位と相関させる.
主な方法:
- 23S.rRNAの因子依存の"足跡"を検出するために化学的探査技術を活用しました.
- E. coliのリボソームを用いてin vitroとin vivoの両方で実験を行った.
- rRNAの既知の機能部位との関係で足跡の位置を分析した.
主要な成果:
- 位置1,067 (ドメインII) および位置2,660 (ドメインVI) 周辺の23S rRNAにEF-G依存の足跡が観察されました.
- EF-Tuは,in vitroの足跡が2,655と2,661の位置で重なり合っていることを示したが,1,067.0の位置では相互作用が検出されなかった.
- 特定された1,067の領域は,抗生物質のチオストレプトンとタンパク質L11を結合することが知られているが,2,660の領域は,アルファサルシンやリシンなどのサイトトキシンが標的となっている.
結論:
- EF-Gは,チオストレプトン/L11結合部位 (1,067) と普遍的に保存されたループ (2,660) を含む23S rRNAの特定の領域と直接相互作用する.
- EF-Tuは23S rRNAの2660領域とも相互作用し,rRNAが延長因子機能を媒介する役割を示唆している.
- これらの発見は,トランスレーションの構造的基礎と,伸縮因子活性を調節する潜在的なメカニズムについての洞察を提供します.
関連する概念動画
Transcription Elongation Factors
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
Improving Translational Accuracy
Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
Initiation of Translation
Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
Leaky Scanning
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA. Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
Directing Proteins to the Rough Endoplasmic Reticulum
The organelle-specific signaling sequences direct proteins synthesized in the cytosol to their final destination like ER, mitochondria, peroxisomes, etc. Some of the proteins directed to ER are then trafficked via vesicles to other organelles within the cell or the extracellular environment through the Golgi complex. For example, the rough ER synthesizes soluble proteins for transportation to the lysosomes or secretion out of the cell. It can also synthesize transmembrane proteins that can...
Transcription Elongation Factors
Transcription elongation is a dynamic process that alters depending upon the sequence heterogeneity of the DNA being transcribed. Hence, it is not surprising that the elongation complex's composition also varies along the way while transcribing a gene.
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...
The transcription elongation is regulated via pausing of RNA polymerase on several occasions during transcription. In bacteria, these halts are necessary because the transcription of DNA into mRNA is coupled to the translation of that mRNA into a...

