Methanocaldococcus infernusの窒素化コファクターマチューラーゼNifBに存在する3つの鉄硫黄群の電子パラマグネティック共振特性
Jarett Wilcoxen1, Simon Arragain2, Alessandro A Scandurra2
1Department of Chemistry, University of California , Davis, California 95616, United States.
Journal of the American Chemical Society
|June 9, 2016
まとめ
この研究では,Methanocaldococcus infernusのNifB酵素は,ラジカルS-アデノシルメチオニン (SAM) 酵素であることを示しています. 窒素酶機能に不可欠な鉄モリブデンコファクター (FeMo-co) の成熟に重要な役割を果たします.
科学分野:
- 生物化学
- 酵素学
- 微生物学
背景:
- 窒素酵素は生物学的窒素固定に不可欠である.
- 鉄モリブデン共因子 (FeMo-co) は窒素酵素活性に不可欠である.
- NifBはFeMo- coの生物合成経路における重要な酵素である.
研究 の 目的:
- メタノゲンであるメタノカルドコックス・インフェルナスの NifB のメカニズムを調査する.
- NifB共因子 (NifB-co) の形成におけるNifBの役割について説明する.
- NifBにおける補助 [Fe-S]クラスタの機能を明らかにする.
主な方法:
- 電子パラマグネティック共振 (EPR) スペクトロスコーピー
- 酵素活性を評価する生化学的測定法
- ラジカルSAM酵素機構の特徴
主要な成果:
- M. infernusのNifBは,ラジカルS-アデノシルメチオニン (SAM) 酵素として機能する.
- NifBはSAMを還元的に割って5'-デオキシアデノシン基を形成する.
- SAM結合および補助クラスターを含む3つの [4Fe-4S]クラスターが特徴付けられました.
- 補助クラスターへの窒素調整は,NifB-coの形成と解離に役割を果たすことを示唆している.
結論:
- M. infernusからのNifBはFeMo-co成熟に適しています.
- 特定された補助クラスターは,NifB-co形成のための基板である可能性が高い.
- NifBのメカニズムを理解することで,窒素酵素生物合成の洞察が得られます.
関連する概念動画
Colors and Magnetism
14.5K
Color in Coordination Complexes
When atoms or molecules absorb light at the proper frequency, their electrons are excited to higher-energy orbitals. For many main group atoms and molecules, the absorbed photons are in the ultraviolet range of the electromagnetic spectrum, which cannot be detected by the human eye. For coordination compounds, the energy difference between the d orbitals often allows photons in the visible range to be absorbed and emitted, which is seen as colors by the human...
When atoms or molecules absorb light at the proper frequency, their electrons are excited to higher-energy orbitals. For many main group atoms and molecules, the absorbed photons are in the ultraviolet range of the electromagnetic spectrum, which cannot be detected by the human eye. For coordination compounds, the energy difference between the d orbitals often allows photons in the visible range to be absorbed and emitted, which is seen as colors by the human...
14.5K
Other Nuclides: 31P, 19F, 15N NMR
861
Many organic, inorganic, and biological molecules contain spin-half nuclei such as nitrogen-15, fluorine-19, and phosphorus-31. As a result, NMR studies of these nuclei have found extensive applications in chemical and biological research.
While fluorine-19 and phosphorous-31 have high natural abundances (100%) and positive gyromagnetic ratios, nitrogen-15 has a low natural abundance and a negative gyromagnetic ratio. However, nitrogen-15 is still preferred over nitrogen-14 (which has a...
While fluorine-19 and phosphorous-31 have high natural abundances (100%) and positive gyromagnetic ratios, nitrogen-15 has a low natural abundance and a negative gyromagnetic ratio. However, nitrogen-15 is still preferred over nitrogen-14 (which has a...
861
NMR Spectroscopy Of Amines
11.6K
In proton NMR spectroscopy, primary amines and secondary amines showcase their N–H protons as a broad signal in the chemical shift range between δ 0.5 and 5 ppm. The exact position in this range depends on several factors, including sample concentration, hydrogen bonding, and the type of solvent used. Since amine protons undergo fast proton exchange in solution, the protons are labile and therefore do not participate in any splitting with adjacent protons. Thus, the observed peak is...
11.6K
Microbes and Other Elemental Cycles
23
Microbial activity plays a pivotal role in the biogeochemical cycling of iron and manganese, especially at the redox gradients characteristic of stratified aquatic environments. These cycles are driven by microbial transformations between oxidized and reduced forms of the metals, allowing organisms to exploit them for metabolic energy and structural purposes.Iron Cycling Across Redox GradientsIn neutral, oxygen-rich surface waters, iron is predominantly found in its oxidized, insoluble ferric...
23
Inorganic Nitrogen Assimilation
759
Nitrogen is an essential element in biological systems, forming a crucial component of proteins, nucleic acids, and other cellular constituents. Many bacteria and archaea acquire nitrogen in the form of nitrate (NO₃⁻) or ammonia (NH₃), which are then assimilated into biomolecules through specific enzymatic pathways.Assimilatory Nitrate ReductionWhen nitrate enters the cell, it undergoes a two-step reduction process known as assimilatory nitrate reduction. Initially, the enzyme...
759
¹H NMR: Complex Splitting
2.1K
A proton M that is coupled to a proton X results in doublet signals for M. However, NMR-active nuclei can be simultaneously coupled to more than one nonequivalent nucleus. When M is coupled to a second proton A, such as in styrene oxide, each peak in the doublet is split into another doublet.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied...
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied...
2.1K

![Protein Film Infrared Electrochemistry Demonstrated for Study of H2 Oxidation by a [NiFe] Hydrogenase](/_next/image?url=https%3A%2F%2Fcloudfront.jove.com%2FCDNSource%2Fteasers%2F55858.jpg&w=3840&q=50)
