人体組織におけるX染色体不活性化の風景
Taru Tukiainen1,2, Alexandra-Chloé Villani2,3, Angela Yen2,4
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, Massachusetts 02114, USA.
Nature
|October 13, 2017
まとめ
X染色体不活性化 (XCI) は人間では不完全であり,多くの遺伝子が不活性なX染色体での静止を逃れている. この研究は組織にわたるXCIパターンを明らかにし,それが遺伝子発現と表型多様性に影響することを示しています.
科学分野:
- 遺伝学
- エピジェネティクス
- 哺乳類の生物学
背景:
- X染色体不活性化 (XCI) は,哺乳類の性別間の遺伝子配分を均等にする.
- ヒトのXCIは不完全であり,活性X染色体 (Xa) と非活性X染色体 (Xi) の両方において,いくつかの遺伝子が不活性化される.
- XCI脱出の組織特異的および個々の変動性とその現象的影響は十分に理解されていません.
研究 の 目的:
- 人間の組織と細胞の XCI パターンを体系的に調査する.
- XCIを逃れた遺伝子を特定し,不完全なXCIの範囲を定量化します.
- XCI脱出と性偏りの遺伝子発現の 関連を調べるため
主な方法:
- GTEx (v6p) の5500以上のトランスクリプトームを29の組織で統合した分析.
- 940個の単細胞のトランスクリプトームと ゲノム配列データを組み込みました
- 活性X染色体と非活性X染色体からのXCIパターンと遺伝子発現の体系的な調査.
主要な成果:
- XCIパターンは人間の組織全体でほぼ均一ですが,個体および細胞レベルで異質性を示しています.
- 少なくとも23%のX染色体遺伝子は不完全なXCIを示し,7つの遺伝子は不活性化を一貫して逃れていると特定されています.
- XCIからの脱出は性バイアス遺伝子発現につながり,表型多様性に寄与します.
結論:
- 欠陥XCIはヒト遺伝子の重要な特徴で 多くの遺伝子に影響します
- この研究は,ヒト組織におけるXCIの包括的なカタログを提供し,その多様性を強調しています.
- 不完全なXCIは,遺伝子発現と潜在的フェノタイプ特性の性差に寄与する.
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