GWASとメタ解析により,深刻なCOVID-19の根底にある49の遺伝子変異種が特定されました
Erola Pairo-Castineira1,2,3, Konrad Rawlik1, Andrew D Bretherick1,2,4
1Baillie Gifford Pandemic Science Hub, Centre for Inflammation Research, The Queen's Medical Research Institute, University of Edinburgh, Edinburgh, UK.
Nature
|May 17, 2023
まとめ
遺伝的要因は,COVID-19における重症性疾患に大きな影響を与える. この研究は49の全ゲノム関連性を特定し,炎症性およびウイルスの侵入経路を含む重度のCOVID-19に対する新しい治療標的を明らかにした.
科学分野:
- 遺伝学
- 感染症
- 免疫学
背景:
- COVID-19における重症病は,遺伝的関連性研究における同質的な現象型を表しています.
- ホスト遺伝子は,重病のCOVID-19患者の免疫調節療法を特定することができます.
研究 の 目的:
- 重症のCOVID-19患者の遺伝的関連と治療標的を特定する.
- 大規模な遺伝データを 機能的ゲノム学と組み合わせて 薬剤の標的を推論する
主な方法:
- ゲノム・ワイド・アソシエーション・スタディ (GWAS) による重篤なCOVID-19症例24,202人のメタ分析.
- 全ゲノムシーケンシング,遺伝子発現 (TWAS),メンデルのランダム化によるゲノタイプデータの統合.
主要な成果:
- ゲノム全体で有意な関連が49つ,新しい発見が16件見つかりました.
- 炎症シグナル伝達 (JAK1),免疫代謝 (SLC2A5,AK5) およびウイルスエントリー (TMPRSS2,RAB2A) で潜在的に薬効性のある標的を発見した.
結論:
- 宿主遺伝子は,重度のCOVID-19において重要な役割を果たします.
- 遺伝的発見は,重度のCOVID-19治療の宿主因子を標的とした潜在的な治療戦略を強調しています.
関連する概念動画
Single Nucleotide Polymorphisms-SNPs
15.3K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
15.3K
Genome-wide Association Studies-GWAS
13.7K
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
13.7K
Human Genetics
634
Human genetics provides a profound framework for understanding the interplay between genetic predispositions and human psychology. At the heart of this discipline lies the study of how genes influence physical traits, behaviors, and susceptibility to diseases. Each person carries a unique genetic code that subtly or significantly shapes their psychological and behavioral landscape.
The complex relationship between genetics and psychology is observable through common biological components such...
The complex relationship between genetics and psychology is observable through common biological components such...
634
Genomics
36.6K
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
36.6K
Incomplete Dominance
22.9K
Gregor Mendel's work (1822 - 1884) was primarily focused on pea plants. Through his initial experiments, he determined that every gene in a diploid cell has two variants called alleles inherited from each parent. He suggested that amongst these two alleles, one allele is dominant in character and the other recessive. The combination of alleles determines the phenotype of a gene in an organism.
22.9K
Comparing Copy Number Variations and SNPs
17.8K
Sequencing of the human genome has opened up several best-kept secrets of the genome. Scientists have identified thousands of genome variations that exist within a population. These variations can be a single nucleotide or a larger chromosomal variation.
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
Copy number variations or CNVs are the structural variations that cover more than 1kb of DNA sequence. The single nucleotide polymorphism (SNP), on the other hand, is a single nucleotide change or a point mutation that is found in more than 1%...
17.8K


