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Viral Structure00:56

Viral Structure

63.6K
Viruses are extraordinarily diverse in shape and size, but they all have several structural features in common. All viruses have a core that contains a DNA- or RNA-based genome. The core is surrounded by a protective coat of proteins called the capsid. The capsid is composed of subunits called capsomeres. The capsid and genome-containing core are together known as the nucleocapsid.
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Cryo-electron Microscopy01:28

Cryo-electron Microscopy

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Conventional electron microscopy (EM) involves dehydration, fixation, and staining of biological samples, which distorts the native state of biological molecules and results in several artifacts. Also, the high-energy electron beam damages the sample and makes it difficult to obtain high-resolution images. These issues can be addressed using cryo-EM, which uses frozen samples and gentler electron beams. The technique was developed by Jacques Dubochet, Joachim Frank, and Richard Henderson, for...
3.6K
Subviral Agents01:29

Subviral Agents

111
Subviral agents are infectious entities that resemble viruses but lack one or more viral components, such as a capsid or essential replication machinery. These agents include viroids, prions, and satellites, each possessing distinct structural and functional characteristics that influence their mode of infection and replication.Viroids are the simplest subviral agents, consisting of circular, single-stranded RNA molecules without a protein coat. They exclusively infect plants, relying entirely...
111
Viruses of Archaea01:29

Viruses of Archaea

77
Archaeal viruses play a crucial role in the ecosystems of extremophilic archaea, particularly those belonging to the phyla Euryarchaeota and Crenarchaeota. By shaping host evolution and facilitating gene transfer, these viruses influence microbial communities and contribute to genetic diversity in extreme environments. The archaea they infect thrive in acidic hot springs and hydrothermal vents characterized by high temperatures and low pH. Archaeal viruses exhibit remarkable structural...
77
Size and Structure of Viral Genomes01:26

Size and Structure of Viral Genomes

141
Viral genomes exhibit remarkable diversity in size, structure, and composition, influencing their replication strategies and interactions with host cells. These genomes consist of either DNA or RNA and may be linear or circular. Additionally, they can be single-stranded or double-stranded, with each configuration affecting how the virus propagates within a host. RNA viruses, for instance, generally have smaller genomes than DNA viruses, a factor that contributes to their high mutation rates and...
141
Introduction to Virus01:28

Introduction to Virus

206
Viruses are unique biological entities that blur the boundary between living and non-living systems. Although they lack cellular structure and metabolic processes, they can exhibit characteristics of life when infecting a host. Their defining feature is a nucleic acid core, composed of either DNA or RNA, encapsulated within a protein coat called a capsid. This simple structure allows them to invade host cells and use their machinery for replication efficiently.Viral Structure and...
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Updated: Sep 10, 2025

Advancing High-Resolution Imaging of Virus Assemblies in Liquid and Ice
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Advancing High-Resolution Imaging of Virus Assemblies in Liquid and Ice

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セネカバレーウイルスのA粒子と関連する構造状態の冷凍-EM構造

Rosheny Kumaran1, Nadishka Jayawardena1,2, Kuan-Lin Chen2

  • 1Department of Microbiology and Immunology, University of Otago, Dunedin, Otago, New Zealand.

Journal of virology
|August 20, 2025
PubMed
まとめ

セネカバレーウイルス (SVV) のカプシド変異は構造的に特徴付けられ,ゲノム放出中に中間の変異 (A) と空回転 (ER) 粒子を明らかにした. これらの発見は,SVVの腫瘍解剖的メカニズムの理解を進める.

キーワード:
セネカ・バレーウイルスのゲノム剥離カプシドクリオ電子顕微鏡ピコナウイルス

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Do's and Don'ts of Cryo-electron Microscopy: A Primer on Sample Preparation and High Quality Data Collection for Macromolecular 3D Reconstruction
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Averaging of Viral Envelope Glycoprotein Spikes from Electron Cryotomography Reconstructions using Jsubtomo
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関連する実験動画

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Do's and Don'ts of Cryo-electron Microscopy: A Primer on Sample Preparation and High Quality Data Collection for Macromolecular 3D Reconstruction
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科学分野:

  • 構造的ウイルス学
  • 分子生物学
  • 腫瘍溶解性ウイルス療法

背景:

  • ピコルナウイルスの細胞への侵入は,カプシドの形状の変化とゲノム剥離を含みます.
  • セネカバレーウイルス (SVV) のような非エントロウイルスには中間の変異した (A) 粒子が存在すると推測されたが,これは構造的に確認されなかった.
  • SVVは腫瘍内皮マーカー8 (TEM8) を経由して癌細胞を標的とする腫瘍性ウイルスであり,酸性pHで分解する.

研究 の 目的:

  • 酸性条件下で,TEM8と複合して,SVVの脱膜介質を構造的に調査する.
  • エントロウイルス以外の A粒子の存在を確認する
  • 潜在的治療最適化のためのSVVカプシド分解の構造的基礎を解明する.

主な方法:

  • SVVを分析するために,冷凍電子顕微鏡 (cryo-EM) が使用された.
  • 構造調査は,酸性条件下でSVVで行われました.
  • 生理学的pHでその受容体TEM8と複合したSVVも研究されました.

主要な成果:

  • 変異した (A) 粒子,空回転した (ER) 粒子,ゲノムを放出する開いた粒子を含む複数のSVV脱膜介質が特定されました.
  • A粒子は膨張し,タンパク質間の接触が減少し,N末端 (VP1,VP2) とVP4が乱れた.
  • ER粒子は回転したペンタマー,内部接触が少なく,ゲノムが欠け,VP1/VP2のN末端とVP4が乱れた.

結論:

  • この研究は,一時的なSVV A粒子の直接的な構造的証拠を提供し,その存在を非エントロウイルスで支持しています.
  • 受容体結合 (TEM8) と酸性pHは,SVVカプシドの構造変化の主要な要因として特定されました.
  • これらの構造的状態を理解することで,SVVの最適化を図り,がん治療の強化を図ることができます.