LRP1-フィブリノーゲン相互作用におけるQCM-Dおよび分子動力学によって明らかになった多価結合メカニズム
Liam Kwak1, Kevin Ye1, Ananya Vinay1
1Department of Chemistry, Pomona College, 645 N College Avenue, Claremont, California 91711 USA.
Abstract:
Inflammatory diseases involve dysregulated coagulation and impaired clearance pathways, leading to altered behavior of plasma proteins and their receptors. Fibrinogen, a key acute-phase protein, is elevated in systemic inflammation, yet its clearance mechanisms remain poorly understood. We previously identified a stable, sialylation-dependent interaction between low-density lipoprotein receptor-related protein 1 (LRP1) and fibrinogen, suggesting a potential role for LRP1 in fibrinogen homeostasis. Here, we quantitatively and structurally define this interaction using an integrated biophysical and computational approach. A modified quartz crystal microbalance assay revealed a moderately strong and specific affinity (Kd ≈ 102 nM) between LRP1 and fibrinogen. Molecular dynamics simulations uncovered a previously unrecognized multimodal binding mechanism, wherein LRP1 engages four distinct fibrinogen sites through heterogeneous electrostatic, hydrophobic, and cation-π interactions. This multivalent interface (∼3,100 Å2) extends canonical LRP1-ligand recognition patterns and provides a mechanistic basis for fibrinogen clearance under inflammatory conditions. Our findings advance the structural understanding of LRP1 as a clearance receptor and establish a framework for targeting LRP1-fibrinogen interactions in thromboinflammatory disease.
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