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関連する概念動画

The Eukaryotic Promoter Region02:40

The Eukaryotic Promoter Region

18.7K
The eukaryotic promoter region is a segment of DNA located upstream of a gene. It contains an RNA polymerase binding site, a transcription start site, and several cis-regulatory sequences.  The proximal promoter region is located in the vicinity of the gene and has cis-regulatory sequences and the core promoter. The core promoter is the binding site for RNA polymerase and is usually located between -35 and +35 nucleotides from the transcription start site. The distal promoter regions are...
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The Eukaryotic Promoter Region02:40

The Eukaryotic Promoter Region

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3.8K
Transcription Initiation01:47

Transcription Initiation

20.3K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
20.3K
Eukaryotic Transcription Activators02:42

Eukaryotic Transcription Activators

12.5K
Transcription activators are proteins that promote the transcription of genes from DNA to RNA. In most cases, these proteins contain two separate domains ‒ a domain that binds to DNA and a domain for activating transcription; however, in some cases, a single domain is responsible for both binding and activation of transcription, as seen in the glucocorticoid receptor and MyoD.
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These...
12.5K
RNA Polymerase II Accessory Proteins02:36

RNA Polymerase II Accessory Proteins

10.8K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
10.8K
RNA Polymerase II Accessory Proteins02:36

RNA Polymerase II Accessory Proteins

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関連する実験動画

Updated: Jan 18, 2026

Author Spotlight: An Integrated Workflow to Study the Promoter-Centric Spatio-Temporal Genome Architecture in Scarce Cell Populations
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Author Spotlight: An Integrated Workflow to Study the Promoter-Centric Spatio-Temporal Genome Architecture in Scarce Cell Populations

Published on: April 21, 2023

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Aca7によるプロモーター認識の構造的洞察

So Yeon Lee1,2, Hyun Ho Park1,2

  • 1College of Pharmacy, Chung-Ang University, Seoul, Korea.

The FEBS journal
|January 16, 2026
PubMed
まとめ

アンチCRISPR関連(Aca)タンパク質は、アンチCRISPR(Acr)遺伝子発現を調節する。本研究では、DNAに結合したAca7の構造を明らかにし、Halomonas caseinilyticaにおけるAcrIF11転写を抑制する方法を詳述する。

科学分野:

  • 分子生物学
  • 構造生物学
  • 遺伝学

背景:

  • CRISPR-Casシステムは、細菌のファージに対する適応免疫を提供する。
  • アンチCRISPR(Acr)タンパク質は、ファージによってコードされるCRISPR-Cas阻害剤である。
  • アンチCRISPR関連(Aca)タンパク質は、DNA結合を介してAcr発現を調節する。

研究 の 目的:

  • Aca7タンパク質のDNA結合モチーフの同定と特徴付け。
  • 標的DNAに結合したAca7の結晶構造決定。
  • Aca7によるAcrIF11転写抑制の分子メカニズム解明。

主な方法:

  • AcrIF11-Aca7オペレータープロモーターにおける逆リピート(IR)DNAモチーフの同定。
  • Aca7-DNA複合体の構造を決定するためのX線結晶構造解析。
  • 配列特異的DNA結合を確認するための生化学的アッセイ。

主要な成果:

  • Halomonas caseinilytica由来のAcrIF11-Aca7プロモーターにおけるIRモチーフの初の同定。
  • IR DNAに結合した対称的なAca7二量体を明らかにする結晶構造。
キーワード:
Aca7CRISPR-CasシステムアンチCRISPRアンチCRISPR関連結晶構造

さらに関連する動画

Promoter Capture Hi-C: High-resolution, Genome-wide Profiling of Promoter Interactions
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Promoter Capture Hi-C: High-resolution, Genome-wide Profiling of Promoter Interactions

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CD Spectroscopy to Study DNA-Protein Interactions
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CD Spectroscopy to Study DNA-Protein Interactions

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関連する実験動画

Last Updated: Jan 18, 2026

Author Spotlight: An Integrated Workflow to Study the Promoter-Centric Spatio-Temporal Genome Architecture in Scarce Cell Populations
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Author Spotlight: An Integrated Workflow to Study the Promoter-Centric Spatio-Temporal Genome Architecture in Scarce Cell Populations

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Promoter Capture Hi-C: High-resolution, Genome-wide Profiling of Promoter Interactions
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Promoter Capture Hi-C: High-resolution, Genome-wide Profiling of Promoter Interactions

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CD Spectroscopy to Study DNA-Protein Interactions
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CD Spectroscopy to Study DNA-Protein Interactions

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  • Aca7は、ヘリックス-ターン-ヘリックスモチーフをメジャ​​ーグルーブ結合に利用し、マイナーグルーブ接触をDNA曲げに利用する。
  • 特定のアミノ酸残基(R38、Q42、K46、K49)が配列認識に重要である。
  • 結論:

    • Aca7は、AcrIF11-Aca7プロモーター内のIRエレメントを特異的に認識し、結合する。
    • 本研究は、Aca7を介した転写抑制の詳細な分子メカニズムを提供する。
    • 本研究結果は、Acaタンパク質の多様性と転写調節戦略の理解を深める。