スポンジ「ファケリア・ベンチラブルム」(リンネ、1767)の染色体ゲノム配列とその関連微生物メタゲノム配列
Sergi Taboada1, Ana Riesgo1, Kathrin Busch2,3
1Department of Biodiversity and Evolutionary Biology, MNCN-National Museum of Natural Sciences, Madrid, Spain.
Abstract:
We present a genome assembly from a specimen of Phakellia ventilabrum (Porifera; Demospongiae; Bubarida; Bubaridae). The genome sequence has a total length of 211.92 megabases. Most of the assembly (99.97%) is scaffolded into 25 chromosomal pseudomolecules. The mitochondrial genome has also been assembled and is 24.36 kilobases in length. Gene annotation of this assembly by Ensembl identified 21 622 protein-coding genes. Thirty-three binned genomes were generated from the metagenome assembly, of which eight were classified as high-quality metagenome assembled genomes (MAGs) and of which four of the MAGs are fully circular. The MAGs were taxonomically assigned to Pseudomonadota (i.e. Candidatus Poriferihabitaceae), Nitrospirota, Nitrospinota, and the archaeal Nitrosopumilus clade.
関連する概念動画
Cis-regulatory Sequences
Chromosome Replication
Sequences
Sanger Sequencing
Arithmetic Sequences
Next-generation Sequencing
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....


