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Updated: Feb 13, 2026

Sample Drift Correction Following 4D Confocal Time-lapse Imaging
Published on: April 12, 2014
マルチパス4D-STEMのドリフト補正方法
Ali Mostaed1, Chen Huang2, Amirafshar Moshtaghpour2
1The Rosalind Franklin Institute, Didcot, OX11 0QS, UK; Department of Materials, University of Oxford, Oxford, OX1 3PH, UK.
Abstract:
Phase contrast imaging in (scanning) transmission electron microscopy ((S)TEM) is among the most effective approach for investigating local structures, at near atomic resolution in beam-sensitive weakly scattering materials including biological samples. However, they often show poor contrast and low signal-to-noise ratio (SNR) at low electron fluence. Multi-pass data acquisition can be used to improve the SNR, however sample drift between data acquisition often complicates the multi-pass approach, particularly at high magnifications. Although numerous drift correction methods have been developed for conventional phase contrast imaging in the TEM, effective drift correction for multi-pass 4D-STEM data acquisition for low fluence electron ptychography has not been extensively explored. In this paper, we report on two approaches for calculating drift vectors at each probe position between passes; one based on the reconstructed ptychographic phase in real space and the other using diffraction patterns. We demonstrate that both methods are effective in calculating and correcting drift when a defocused probe is used for 4D-STEM data acquisition and improve the contrast of low SNR ptychographic phase reconstructions.
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