RNAダイナミクスと相互作用の原子論的シミュレーションによる解明
Olivier Languin-Cattoën1, Giovanni Bussi1
1Scuola Internazionale Superiore di Studi Avanzati (SISSA), Trieste, Italy;
Abstract:
RNA function is deeply intertwined with its conformational dynamics. In this review, we survey recent advances in the use of atomistic molecular dynamics simulations to characterize RNA dynamics in diverse contexts, including isolated molecules and complexes with ions, small molecules, or proteins. We highlight how enhanced sampling techniques and integrative approaches can improve both the precision and accuracy of the resulting structural ensembles. Finally, we examine the emerging role of artificial intelligence in accelerating progress in RNA modeling and simulation.
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