オリエンテッドヘテロダイマーを用いて二次元転写活性化タンパク質の機能サブユニットの識別
1Department of Chemistry, Rutgers University, New Brunswick, New Jersey 08855.
Cell
|April 23, 1993
まとめ
二次元CAPタンパク質による転写活性化には,プロモーター近隣サブユニットから1つの機能的活性化領域のみが必要です. この発見は,遺伝子調節機構の理解を進める.
科学分野:
- 分子生物学は分子生物学である.
- 遺伝学 遺伝学とは
- バイオケミストリー バイオケミストリー
背景:
- 循環型AMP受容体タンパク質 (CAP) は,細菌における重要な転写活性化剤である.
- CAPは,特定のDNAプロモーターサイトでの遺伝子発現を調節するダイマーとして機能します.
研究 の 目的:
- 転写活性化におけるCAPサブユニットの機能要求を調査する.
- どのCAPサブユニットの活性化領域がトランスクリプションを開始するために不可欠であるかを決定します.
主な方法:
- 異なるサブユニット機能 (DNA結合対活性化) を有する異体型CAPタンパク質の構成.
- これらのヘテロダイマーの指向は,混合特異性のCAP結合部位を持つエンジニアリングされたラックプロモーターDNA上にあります.
- オリエンテッドヘテロダイマーによる転写活性化の測定.
主要な成果:
- 転写活性化は,プロモーター近接CAPサブユニットのみが機能的活性化領域を有しているヘテロダイマーで観察されました.
- プロモーター-遠隔サブユニットのDNA結合特異性は,転写活性化に影響を与えませんでした.
- プロモーター近接サブユニットの1つの機能的活性化領域が,CAP媒介による転写活性化に十分である.
結論:
- 二次元CAPタンパク質による転写活性化は,プロモーター近隣亜単体の活性化領域のみに依存する.
- このサブユニット固有のアクティベーション要件は,CAP機能の重要な特徴です.
- 開発された方法論は,他の二次元転写因子の研究に潜在的に適用可能である.
関連する概念動画
RNA Polymerase II Accessory Proteins
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
Eukaryotic Transcription Activators
Transcription activators are proteins that promote the transcription of genes from DNA to RNA. In most cases, these proteins contain two separate domains ‒ a domain that binds to DNA and a domain for activating transcription; however, in some cases, a single domain is responsible for both binding and activation of transcription, as seen in the glucocorticoid receptor and MyoD.
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These domains are...
The binding domains are capable of recognizing and interacting with regulatory sequences on the DNA. These domains are...
Leaky Scanning
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA. Marilyn Kozak discovered that the sequence RCCAUGG (where R stands for...
Ribosome Profiling
Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique helps...
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique helps...
RNA Polymerase II Accessory Proteins
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
Transducer Mechanism: Enzyme-Linked Receptors
Enzyme-linked receptors are cell-surface receptors acting as an enzyme or associating with an enzyme intracellularly. They make excellent drug targets. Drugs can bind to the extracellular ligand-binding domain or directly affect their enzymatic domain and alter their activity.
Major types that are helpful drug targets include:
Major types that are helpful drug targets include:


