长DNA分子的分离在一个微构造的热陷阵列中
1School of Applied and Engineering Physics, Cornell University, Ithaca, NY 14853, USA.
概括
一种新的纳米流体装置使用热陷来分离长的DNA分子,无需凝或复杂的电场. 这项技术可以在紧的,集成的系统中进行高效的DNA分析.
科学领域:
- 生物物理学的生物物理.
- 纳米技术 纳米技术
- 分子生物学分子生物学
背景情况:
- 凝电泳和脉冲场凝电泳是分离长DNA分子的标准方法.
- 这些方法耗时,劳动密集,需要专门的设备.
- 需要更快,更高效,更易于使用的DNA分离技术.
研究的目的:
- 设计和制造一种纳米流体通道装置,用于分离长DNA分子.
- 通过使用热效应来证明尺寸依赖的DNA捕获和分离.
- 评估综合DNA分析系统的效率和潜力.
主要方法:
- 制造一个纳米流体通道装置与的陷,以狭窄的狭窄和更宽的区域.
- 利用依赖大小的DNA在收缩处捕获以诱导电泳性移动性差异.
- 在15毫米通道内分离5000至16万个基对的DNA分子.
主要成果:
- 长长的DNA分子被有效地分离成不同的波段.
- 该设备显示了尺寸依赖的捕获,导致移动性差异.
- 成功证明了多通道设备的并行操作.
结论:
- 纳米流体热陷装置为DNA分离提供了一种高效且无凝的方法.
- 该设备的紧性和易于制造,为实用的集成DNA分析铺平了道路.
- 这项技术有望推动基因组研究和诊断.
相关概念视频
DNA Packaging
Overview
Chromatin Packaging
Each human somatic cell contains 6 billion base-pairs of DNA. Each base-pair is 0.34 nm long, which means that each diploid cell contains a staggering 2 meters of DNA. How is such a long DNA strand packed inside a nucleus measuring only 10 - 20 microns in diameter?
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order structures.
The chromatin
In combination with specialized DNA binding protein called Histones, the DNA double helix forms a compact DNA: protein complex called chromatin. The chromatin itself is further compacted into higher-order structures.
DNA Helicases
DNA unwinding helicase enzymes are a type of motor protein. Motor proteins can translocate along filaments or polymers using energy generated from ATP hydrolysis. Helicases are involved in all the important cellular processes where DNA unwinding is required, such as DNA replication, repair, recombination, and transcription. They are present in all living organisms, but vary in their structure, function, and mechanism of action. For example, in prokaryotes, DnaB helicase binds and translocates...
Homologous Recombination
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
Condensins
Condensins are large protein complexes that use ATP to fuel the assembly of chromosomes during mitosis. They transform the tangled, shapeless mass of post-interphase DNA into individualized chromosomes by compacting, organizing, and segregating chromosomal DNA.
The plant and animal cells contain two types of condensin complexes—condensin I and condensin II. Both complexes have five subunits: two SMC (Structural Maintenance of Chromosomes) subunits, a kleisin subunit, and two HEAT-repeat...
The plant and animal cells contain two types of condensin complexes—condensin I and condensin II. Both complexes have five subunits: two SMC (Structural Maintenance of Chromosomes) subunits, a kleisin subunit, and two HEAT-repeat...
Chromatin Packaging
Each human somatic cell contains 6 billion base pairs of DNA. Each base pair is 0.34 nm long, meaning each diploid cell contains a staggering 2 meters of DNA. This long DNA strand is packed inside a nucleus measuring only 10-20 microns in diameter with the help of specialized DNA-binding proteins called histones. Together they form a compact DNA-protein complex called chromatin. The chromatin is further compacted into higher-order structures. The highest level of compaction is achieved during...


